{ "tc_result": [ { "organism_name": "Salinicola salarius", "strain": "strain=DSM 18044", "accession": "GCA_003206135.1", "taxid": 430457, "species_taxid": 430457, "relation_to_type": "type", "validated": true, "ani": 94.7117, "matched_fragments": 594, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola socius", "strain": "strain=DSM 19940", "accession": "GCA_003206115.1", "taxid": 404433, "species_taxid": 404433, "relation_to_type": "type", "validated": true, "ani": 85.5792, "matched_fragments": 541, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola socius", "strain": "strain=SMB35", "accession": "GCA_001937195.1", "taxid": 404433, "species_taxid": 404433, "relation_to_type": "type", "validated": true, "ani": 85.5555, "matched_fragments": 539, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola halophyticus", "strain": "strain=CR45", "accession": "GCA_003206695.1", "taxid": 1808881, "species_taxid": 1808881, "relation_to_type": "type", "validated": true, "ani": 84.7803, "matched_fragments": 529, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola lusitanus", "strain": "strain=CR50", "accession": "GCA_003206045.1", "taxid": 1949085, "species_taxid": 1949085, "relation_to_type": "type", "validated": true, "ani": 84.3983, "matched_fragments": 546, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola acroporae", "strain": "strain=LMG 28587", "accession": "GCA_003206615.1", "taxid": 1541440, "species_taxid": 1541440, "relation_to_type": "type", "validated": true, "ani": 84.118, "matched_fragments": 536, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola halimionae", "strain": "strain=CPA60", "accession": "GCA_003206065.1", "taxid": 1949081, "species_taxid": 1949081, "relation_to_type": "type", "validated": true, "ani": 83.9868, "matched_fragments": 520, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola peritrichatus", "strain": "strain=JCM 18795", "accession": "GCA_003206715.1", "taxid": 1267424, "species_taxid": 1267424, "relation_to_type": "type", "validated": true, "ani": 83.5624, "matched_fragments": 513, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola endophyticus", "strain": "strain=CPA92", "accession": "GCA_003206575.1", "taxid": 1949083, "species_taxid": 1949083, "relation_to_type": "type", "validated": true, "ani": 81.6778, "matched_fragments": 468, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salinicola tamaricis", "strain": "strain=F01", "accession": "GCA_003006155.1", "taxid": 1771309, "species_taxid": 1771309, "relation_to_type": "type", "validated": true, "ani": 81.5938, "matched_fragments": 459, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas shengliensis", "strain": "strain=CGMCC 1.6444", "accession": "GCA_900104135.1", "taxid": 419597, "species_taxid": 419597, "relation_to_type": "type", "validated": true, "ani": 78.8868, "matched_fragments": 232, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas lactosivorans", "strain": "strain=KCTC 52281", "accession": "GCA_003254665.1", "taxid": 2185141, "species_taxid": 2185141, "relation_to_type": "type", "validated": true, "ani": 78.8444, "matched_fragments": 270, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas salipaludis", "strain": "strain=WRN001", "accession": "GCA_002286975.1", "taxid": 2032625, "species_taxid": 2032625, "relation_to_type": "type", "validated": true, "ani": 78.7995, "matched_fragments": 279, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas stenophila", "strain": "strain=CECT 7744", "accession": "GCA_014192275.1", "taxid": 795312, "species_taxid": 795312, "relation_to_type": "type", "validated": true, "ani": 78.7986, "matched_fragments": 253, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidoxydans", "strain": "strain=MCCC 1A11059", "accession": "GCA_017868775.1", "taxid": 2733484, "species_taxid": 2733484, "relation_to_type": "type", "validated": true, "ani": 78.7552, "matched_fragments": 266, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas zhangzhouensis", "strain": "strain=MCCC 1A11036", "accession": "GCA_021404465.1", "taxid": 2733481, "species_taxid": 2733481, "relation_to_type": "type", "validated": true, "ani": 78.4013, "matched_fragments": 214, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aerodenitrificans", "strain": "strain=MCCC 1A11058", "accession": "GCA_021404405.1", "taxid": 2733483, "species_taxid": 2733483, "relation_to_type": "type", "validated": true, "ani": 78.358, "matched_fragments": 248, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas lysinitropha", "strain": "strain=3(2)", "accession": "GCA_902500215.1", "taxid": 2607506, "species_taxid": 2607506, "relation_to_type": "type", "validated": true, "ani": 78.1959, "matched_fragments": 205, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas tianxiuensis", "strain": "strain=BC-M4-5", "accession": "GCA_009834345.1", "taxid": 2497861, "species_taxid": 2497861, "relation_to_type": "type", "validated": true, "ani": 78.1869, "matched_fragments": 237, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas icarae", "strain": "strain=D1-1", "accession": "GCA_009901955.1", "taxid": 2691040, "species_taxid": 2691040, "relation_to_type": "type", "validated": true, "ani": 78.1318, "matched_fragments": 172, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas urumqiensis", "strain": "strain=BZ-SZ-XJ27", "accession": "GCA_003028575.1", "taxid": 1684789, "species_taxid": 1684789, "relation_to_type": "type", "validated": true, "ani": 78.0557, "matched_fragments": 193, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas urumqiensis", "strain": "strain=BZ-SZ-XJ27", "accession": "GCA_002879635.1", "taxid": 1684789, "species_taxid": 1684789, "relation_to_type": "type", "validated": true, "ani": 78.0072, "matched_fragments": 195, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas halodenitrificans", "strain": "strain=DSM 735", "accession": "GCA_000620045.1", "taxid": 28252, "species_taxid": 28252, "relation_to_type": "type", "validated": true, "ani": 77.8531, "matched_fragments": 172, "total_fragments": 662, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 84.81, "contamination": 13.54, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_002179555.1", "gtdb_species": "s__Salinicola salarius_A", "ani": 98.0655, "matched_fragments": 632, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_003206135.1", "gtdb_species": "s__Salinicola salarius", "ani": 94.7117, "matched_fragments": 594, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.80", "min_intra_species_ani": "97.80", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001937195.1", "gtdb_species": "s__Salinicola socius", "ani": 85.5555, "matched_fragments": 539, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.48", "min_intra_species_ani": "98.96", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002695065.1", "gtdb_species": "s__Salinicola sp002695065", "ani": 85.2622, "matched_fragments": 519, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.83", "min_intra_species_ani": "97.83", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008298015.1", "gtdb_species": "s__Salinicola sp008298015", "ani": 84.9588, "matched_fragments": 531, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003206695.1", "gtdb_species": "s__Salinicola halophyticus", "ani": 84.7911, "matched_fragments": 528, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.72", "min_intra_species_ani": "97.72", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003206045.1", "gtdb_species": "s__Salinicola lusitanus", "ani": 84.3851, "matched_fragments": 546, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.87", "min_intra_species_ani": "96.87", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003206715.1", "gtdb_species": "s__Salinicola peritrichatus", "ani": 83.5757, "matched_fragments": 512, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014652715.1", "gtdb_species": "s__Salinicola rhizosphaerae", "ani": 80.8354, "matched_fragments": 452, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003206645.1", "gtdb_species": "s__Salinicola aestuarinus", "ani": 80.2205, "matched_fragments": 383, "total_fragments": 662, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Halomonadaceae;g__Salinicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }