{ "tc_result": [ { "organism_name": "Ketobacter alkanivorans", "strain": "strain=GI5", "accession": "GCA_002863865.1", "taxid": 1917421, "species_taxid": 1917421, "relation_to_type": "type", "validated": true, "ani": 80.1221, "matched_fragments": 634, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax jadensis", "strain": "strain=T9", "accession": "GCA_000756655.1", "taxid": 64988, "species_taxid": 64988, "relation_to_type": "type", "validated": true, "ani": 76.3831, "matched_fragments": 89, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax hongdengensis", "strain": "strain=A-11-3", "accession": "GCA_000300995.1", "taxid": 519051, "species_taxid": 519051, "relation_to_type": "type", "validated": true, "ani": 76.2549, "matched_fragments": 94, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter nauticus", "strain": "strain=DSM 50418", "accession": "GCA_003634635.1", "taxid": 2743, "species_taxid": 2743, "relation_to_type": "type", "validated": true, "ani": 76.2463, "matched_fragments": 63, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter profundi", "strain": "strain=PWS21", "accession": "GCA_002744715.1", "taxid": 2666256, "species_taxid": 2666256, "relation_to_type": "type", "validated": true, "ani": 76.2251, "matched_fragments": 52, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alcanivorax balearicus", "strain": "strain=MACL04", "accession": "GCA_025532145.1", "taxid": 413232, "species_taxid": 413232, "relation_to_type": "type", "validated": true, "ani": 75.9648, "matched_fragments": 88, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter arenosus", "strain": "strain=CAU 1620", "accession": "GCA_019264345.1", "taxid": 2856822, "species_taxid": 2856822, "relation_to_type": "type", "validated": true, "ani": 75.8195, "matched_fragments": 56, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas hydrolytica", "strain": "strain=DSWY01", "accession": "GCA_021495345.2", "taxid": 2493633, "species_taxid": 2493633, "relation_to_type": "type", "validated": true, "ani": 75.7855, "matched_fragments": 64, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter similis", "strain": "strain=A3d10", "accession": "GCA_000830985.1", "taxid": 1420916, "species_taxid": 1420916, "relation_to_type": "type", "validated": true, "ani": 75.7772, "matched_fragments": 55, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter xestospongiae", "strain": "strain=JCM 17469", "accession": "GCA_023156385.1", "taxid": 994319, "species_taxid": 994319, "relation_to_type": "type", "validated": true, "ani": 75.7397, "matched_fragments": 81, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aeruginosa", "strain": "strain=DSM 50071", "accession": "GCA_012987025.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 75.6169, "matched_fragments": 67, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aeruginosa", "strain": "strain=DSM 50071", "accession": "GCA_001042925.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 75.5991, "matched_fragments": 68, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aeruginosa", "strain": "strain=JCM 5962", "accession": "GCA_022496575.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 75.5912, "matched_fragments": 66, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aeruginosa", "strain": "strain=DSM 50071", "accession": "GCA_900167195.1", "taxid": 287, "species_taxid": 287, "relation_to_type": "type", "validated": true, "ani": 75.5378, "matched_fragments": 67, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariirhabdus litorea", "strain": "strain=GTF13", "accession": "GCA_003864255.1", "taxid": 2528527, "species_taxid": 2528527, "relation_to_type": "type", "validated": true, "ani": 75.4957, "matched_fragments": 64, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 75.3854, "matched_fragments": 54, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.3854, "matched_fragments": 54, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 75.3853, "matched_fragments": 54, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ekonensis", "strain": "strain=COR58", "accession": "GCA_019145435.1", "taxid": 2842353, "species_taxid": 2842353, "relation_to_type": "type", "validated": true, "ani": 75.2703, "matched_fragments": 60, "total_fragments": 1863, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002471665.1", "gtdb_species": "s__Ketobacter sp002471665", "ani": 99.9448, "matched_fragments": 1726, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.82", "min_intra_species_ani": "99.43", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 14, "status": "conclusive" }, { "accession": "GCF_002863865.1", "gtdb_species": "s__Ketobacter alkanivorans", "ani": 80.1224, "matched_fragments": 634, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002701845.1", "gtdb_species": "s__Ketobacter sp002701845", "ani": 80.0996, "matched_fragments": 591, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003671495.1", "gtdb_species": "s__Ketobacter sp003671495", "ani": 79.6964, "matched_fragments": 853, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002708905.1", "gtdb_species": "s__Ketobacter sp002708905", "ani": 79.6336, "matched_fragments": 801, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009746715.1", "gtdb_species": "s__Ketobacter sp003667185", "ani": 78.0855, "matched_fragments": 265, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Ketobacteraceae;g__Ketobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.27", "min_intra_species_ani": "99.27", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900112645.1", "gtdb_species": "s__Pseudomonas_E straminea", "ani": 75.7553, "matched_fragments": 50, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.06", "min_intra_species_ani": "98.06", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002840055.1", "gtdb_species": "s__Pseudomonas_D sp002840055", "ani": 75.5349, "matched_fragments": 53, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003864255.1", "gtdb_species": "s__Aestuariirhabdus litorea", "ani": 75.4987, "matched_fragments": 66, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Aestuariirhabdaceae;g__Aestuariirhabdus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000380335.1", "gtdb_species": "s__Azotobacter vinelandii", "ani": 75.2921, "matched_fragments": 50, "total_fragments": 1863, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Azotobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.84", "min_intra_species_ani": "99.43", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.95", "num_clustered_genomes": 5, "status": "-" } ] }