{ "tc_result": [ { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_024328335.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 87.1433, "matched_fragments": 127, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_900129835.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 87.1344, "matched_fragments": 128, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] zhaodongensis", "strain": "strain=NEAU-ST5-21", "accession": "GCA_003696365.1", "taxid": 1176257, "species_taxid": 1176257, "relation_to_type": "suspected-type", "validated": true, "ani": 81.3961, "matched_fragments": 116, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] zhaodongensis", "strain": "strain=DSM 27559T", "accession": "GCA_024448735.1", "taxid": 1176257, "species_taxid": 1176257, "relation_to_type": "suspected-type", "validated": true, "ani": 81.3715, "matched_fragments": 116, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=FDAARGOS_876", "accession": "GCA_016028635.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "suspected-type", "validated": true, "ani": 80.2612, "matched_fragments": 79, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_002891015.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 80.2612, "matched_fragments": 79, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas degradans", "strain": "strain=DSM 50238", "accession": "GCA_024448505.1", "taxid": 2968968, "species_taxid": 2968968, "relation_to_type": "type", "validated": true, "ani": 80.2531, "matched_fragments": 79, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas kunmingensis", "strain": "strain=DSM 25974", "accession": "GCA_024397575.1", "taxid": 1211807, "species_taxid": 1211807, "relation_to_type": "type", "validated": true, "ani": 80.0576, "matched_fragments": 93, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas kunmingensis", "strain": "strain=DSM 25974", "accession": "GCA_900114065.1", "taxid": 1211807, "species_taxid": 1211807, "relation_to_type": "type", "validated": true, "ani": 80.0576, "matched_fragments": 93, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas nitrititolerans", "strain": "strain=GL14", "accession": "GCA_003696285.1", "taxid": 2482751, "species_taxid": 2482751, "relation_to_type": "type", "validated": true, "ani": 79.6923, "matched_fragments": 96, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=FDAARGOS_875", "accession": "GCA_016028655.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 79.6468, "matched_fragments": 101, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=CGMCC 1.1803", "accession": "GCA_000219605.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 79.637, "matched_fragments": 101, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] nosocomialis", "strain": "strain=A31/70", "accession": "GCA_005876855.1", "taxid": 1056496, "species_taxid": 1056496, "relation_to_type": "type", "validated": true, "ani": 79.1091, "matched_fragments": 86, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas alcaligenes", "strain": "strain=NCTC10367", "accession": "GCA_900455475.1", "taxid": 43263, "species_taxid": 43263, "relation_to_type": "type", "validated": true, "ani": 78.4651, "matched_fragments": 51, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas tohonis", "strain": "strain=TUM18999", "accession": "GCA_012767755.2", "taxid": 2725477, "species_taxid": 2725477, "relation_to_type": "type", "validated": true, "ani": 78.3636, "matched_fragments": 63, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 78.0912, "matched_fragments": 54, "total_fragments": 156, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 46.31, "contamination": 0.38, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002890895.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AB", "ani": 88.4818, "matched_fragments": 138, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.17", "min_intra_species_ani": "97.01", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.85", "num_clustered_genomes": 18, "status": "-" }, { "accession": "GCA_004010935.1", "gtdb_species": "s__Pseudomonas_A sp004010935", "ani": 87.3855, "matched_fragments": 136, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.94", "min_intra_species_ani": "95.82", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 15, "status": "-" }, { "accession": "GCF_900129835.1", "gtdb_species": "s__Pseudomonas_A xanthomarina", "ani": 87.1344, "matched_fragments": 128, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000235745.1", "gtdb_species": "s__Pseudomonas_A stutzeri_H", "ani": 86.5458, "matched_fragments": 133, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018138085.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AI", "ani": 82.229, "matched_fragments": 128, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.15", "min_intra_species_ani": "96.92", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.86", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_002339675.1", "gtdb_species": "s__Pseudomonas_A stutzeri_O", "ani": 81.8421, "matched_fragments": 118, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000590475.1", "gtdb_species": "s__Pseudomonas_A stutzeri_D", "ani": 81.7925, "matched_fragments": 115, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003527165.1", "gtdb_species": "s__Pseudomonas_A sp003527165", "ani": 81.564, "matched_fragments": 84, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002890795.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AA", "ani": 79.88, "matched_fragments": 88, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015070855.1", "gtdb_species": "s__Pseudomonas_A lopnurensis", "ani": 79.7628, "matched_fragments": 87, "total_fragments": 156, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.76", "min_intra_species_ani": "98.41", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" } ] }