{ "tc_result": [ { "organism_name": "Halopseudomonas salina", "strain": "strain=CGMCC 1.12482", "accession": "GCA_014637955.1", "taxid": 1323744, "species_taxid": 1323744, "relation_to_type": "type", "validated": true, "ani": 80.2184, "matched_fragments": 556, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas salina", "strain": "strain=XCD-X85", "accession": "GCA_008641105.1", "taxid": 1323744, "species_taxid": 1323744, "relation_to_type": "type", "validated": true, "ani": 80.2056, "matched_fragments": 553, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas profundi", "strain": "strain=M5", "accession": "GCA_008638305.1", "taxid": 1981513, "species_taxid": 1981513, "relation_to_type": "type", "validated": true, "ani": 78.3126, "matched_fragments": 240, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas litoralis", "strain": "strain=2SM5", "accession": "GCA_900105005.1", "taxid": 797277, "species_taxid": 797277, "relation_to_type": "type", "validated": true, "ani": 78.1291, "matched_fragments": 233, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas saliphila", "strain": "strain=16W4-4-3", "accession": "GCA_008638345.1", "taxid": 2586906, "species_taxid": 2586906, "relation_to_type": "type", "validated": true, "ani": 78.1277, "matched_fragments": 266, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas bauzanensis", "strain": "strain=DSM 22558", "accession": "GCA_900111225.1", "taxid": 653930, "species_taxid": 653930, "relation_to_type": "type", "validated": true, "ani": 77.955, "matched_fragments": 239, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas pachastrellae", "strain": "strain=JCM 12285", "accession": "GCA_900114765.1", "taxid": 254161, "species_taxid": 254161, "relation_to_type": "type", "validated": true, "ani": 77.7248, "matched_fragments": 270, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas pachastrellae", "strain": "strain=CCUG 46540", "accession": "GCA_001989375.1", "taxid": 254161, "species_taxid": 254161, "relation_to_type": "type", "validated": true, "ani": 77.6599, "matched_fragments": 265, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas syringae group genomosp. 7", "strain": "strain=ICMP 4091", "accession": "GCA_022557255.1", "taxid": 251699, "species_taxid": 251699, "relation_to_type": "pathovar", "validated": true, "ani": 76.9939, "matched_fragments": 87, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas nabeulensis", "strain": "strain=E10B", "accession": "GCA_004682045.1", "taxid": 2293833, "species_taxid": 2293833, "relation_to_type": "type", "validated": true, "ani": 76.9347, "matched_fragments": 95, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cichorii", "strain": "strain=DSM 50259", "accession": "GCA_018343775.1", "taxid": 36746, "species_taxid": 36746, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9332, "matched_fragments": 99, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas edaphica", "strain": "strain=RD25", "accession": "GCA_005863185.1", "taxid": 2006980, "species_taxid": 2006980, "relation_to_type": "type", "validated": true, "ani": 76.9328, "matched_fragments": 90, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cichorii", "strain": "strain=ATCC 10857", "accession": "GCA_900104015.1", "taxid": 36746, "species_taxid": 36746, "relation_to_type": "suspected-type", "validated": true, "ani": 76.9287, "matched_fragments": 101, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas simiae", "strain": "strain=CCUG 50988", "accession": "GCA_001730615.1", "taxid": 321846, "species_taxid": 321846, "relation_to_type": "type", "validated": true, "ani": 76.9208, "matched_fragments": 102, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas kilonensis", "strain": "strain=DSM 13647", "accession": "GCA_001269885.1", "taxid": 132476, "species_taxid": 132476, "relation_to_type": "type", "validated": true, "ani": 76.7908, "matched_fragments": 107, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas simiae", "strain": "strain=CCUG 50988", "accession": "GCA_900111895.1", "taxid": 321846, "species_taxid": 321846, "relation_to_type": "type", "validated": true, "ani": 76.7855, "matched_fragments": 102, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_002890935.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 76.7852, "matched_fragments": 137, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cichorii", "strain": "strain=LMG 2162", "accession": "GCA_015471425.1", "taxid": 36746, "species_taxid": 36746, "relation_to_type": "suspected-type", "validated": true, "ani": 76.7722, "matched_fragments": 100, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_024448335.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 76.7522, "matched_fragments": 136, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=FDAARGOS_877", "accession": "GCA_016028515.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 76.7501, "matched_fragments": 137, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas rhizophila", "strain": "strain=S211", "accession": "GCA_003033885.1", "taxid": 2045200, "species_taxid": 2045200, "relation_to_type": "type", "validated": true, "ani": 76.7113, "matched_fragments": 119, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas paraversuta", "strain": "strain=V4/DAB/S4/2a", "accession": "GCA_904063065.1", "taxid": 2750624, "species_taxid": 2750624, "relation_to_type": "type", "validated": true, "ani": 76.4155, "matched_fragments": 90, "total_fragments": 1048, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_008641105.1", "gtdb_species": "s__Pseudomonas_D salina", "ani": 80.2207, "matched_fragments": 554, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_016763285.1", "gtdb_species": "s__Pseudomonas_D sp016763285", "ani": 79.3789, "matched_fragments": 425, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009497895.1", "gtdb_species": "s__Pseudomonas_D pelagia_A", "ani": 79.2475, "matched_fragments": 414, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000410875.1", "gtdb_species": "s__Pseudomonas_D pelagia", "ani": 79.1161, "matched_fragments": 385, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008365385.1", "gtdb_species": "s__Pseudomonas_D laoshanensis", "ani": 78.9451, "matched_fragments": 408, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.00", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002840055.1", "gtdb_species": "s__Pseudomonas_D sp002840055", "ani": 78.2589, "matched_fragments": 241, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012844345.1", "gtdb_species": "s__Pseudomonas_D sp012844345", "ani": 78.1698, "matched_fragments": 244, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008638345.1", "gtdb_species": "s__Pseudomonas_D saliphila", "ani": 78.123, "matched_fragments": 267, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002979975.1", "gtdb_species": "s__Pseudomonas_D sp002979975", "ani": 77.9609, "matched_fragments": 247, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105655.1", "gtdb_species": "s__Pseudomonas_D salegens", "ani": 77.8431, "matched_fragments": 248, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105255.1", "gtdb_species": "s__Pseudomonas_D sabulinigri", "ani": 77.8244, "matched_fragments": 283, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007117785.1", "gtdb_species": "s__Pseudomonas_D sp007117785", "ani": 77.7519, "matched_fragments": 168, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007692485.1", "gtdb_species": "s__Pseudomonas_D sp007692485", "ani": 77.6119, "matched_fragments": 190, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003444685.1", "gtdb_species": "s__Pseudomonas_D gallaeciensis", "ani": 77.6016, "matched_fragments": 272, "total_fragments": 1048, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.87", "min_intra_species_ani": "97.82", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.85", "num_clustered_genomes": 8, "status": "-" } ] }