{ "tc_result": [ { "organism_name": "Halopseudomonas salina", "strain": "strain=CGMCC 1.12482", "accession": "GCA_014637955.1", "taxid": 1323744, "species_taxid": 1323744, "relation_to_type": "type", "validated": true, "ani": 79.3142, "matched_fragments": 509, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas salina", "strain": "strain=XCD-X85", "accession": "GCA_008641105.1", "taxid": 1323744, "species_taxid": 1323744, "relation_to_type": "type", "validated": true, "ani": 79.3057, "matched_fragments": 510, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas litoralis", "strain": "strain=2SM5", "accession": "GCA_900105005.1", "taxid": 797277, "species_taxid": 797277, "relation_to_type": "type", "validated": true, "ani": 79.1863, "matched_fragments": 394, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas bauzanensis", "strain": "strain=CGMCC 1.9095", "accession": "GCA_900114735.1", "taxid": 653930, "species_taxid": 653930, "relation_to_type": "type", "validated": true, "ani": 78.3869, "matched_fragments": 405, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas profundi", "strain": "strain=M5", "accession": "GCA_008638305.1", "taxid": 1981513, "species_taxid": 1981513, "relation_to_type": "type", "validated": true, "ani": 78.3727, "matched_fragments": 379, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas bauzanensis", "strain": "strain=DSM 22558", "accession": "GCA_900111225.1", "taxid": 653930, "species_taxid": 653930, "relation_to_type": "type", "validated": true, "ani": 78.3721, "matched_fragments": 403, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas saliphila", "strain": "strain=16W4-4-3", "accession": "GCA_008638345.1", "taxid": 2586906, "species_taxid": 2586906, "relation_to_type": "type", "validated": true, "ani": 78.2845, "matched_fragments": 400, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas pachastrellae", "strain": "strain=JCM 12285", "accession": "GCA_900114765.1", "taxid": 254161, "species_taxid": 254161, "relation_to_type": "type", "validated": true, "ani": 78.2767, "matched_fragments": 424, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas pachastrellae", "strain": "strain=CCUG 46540", "accession": "GCA_001989375.1", "taxid": 254161, "species_taxid": 254161, "relation_to_type": "type", "validated": true, "ani": 78.2186, "matched_fragments": 423, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halopseudomonas oceani", "strain": "strain=DSM 100277", "accession": "GCA_002903165.1", "taxid": 1708783, "species_taxid": 1708783, "relation_to_type": "type", "validated": true, "ani": 77.9986, "matched_fragments": 394, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas kunmingensis", "strain": "strain=DSM 25974", "accession": "GCA_024397575.1", "taxid": 1211807, "species_taxid": 1211807, "relation_to_type": "type", "validated": true, "ani": 77.5388, "matched_fragments": 227, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas kunmingensis", "strain": "strain=DSM 25974", "accession": "GCA_900114065.1", "taxid": 1211807, "species_taxid": 1211807, "relation_to_type": "type", "validated": true, "ani": 77.4925, "matched_fragments": 228, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aromaticivorans", "strain": "strain=MAP12", "accession": "GCA_019097855.1", "taxid": 2849492, "species_taxid": 2849492, "relation_to_type": "type", "validated": true, "ani": 77.3641, "matched_fragments": 231, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas chloritidismutans", "strain": "strain=AW-1", "accession": "GCA_000495915.1", "taxid": 203192, "species_taxid": 203192, "relation_to_type": "type", "validated": true, "ani": 77.1846, "matched_fragments": 230, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas songnenensis", "strain": "strain=NEAU-ST5-5", "accession": "GCA_003696315.1", "taxid": 1176259, "species_taxid": 1176259, "relation_to_type": "type", "validated": true, "ani": 77.1615, "matched_fragments": 226, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas massiliensis", "strain": "strain=CB1", "accession": "GCA_000826105.1", "taxid": 522492, "species_taxid": 522492, "relation_to_type": "type", "validated": true, "ani": 76.8093, "matched_fragments": 141, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter flavimaris", "strain": "strain=LMG 23834", "accession": "GCA_002933295.1", "taxid": 262076, "species_taxid": 262076, "relation_to_type": "type", "validated": true, "ani": 76.3352, "matched_fragments": 83, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacter subterrani", "strain": "strain=JG233", "accession": "GCA_001045555.1", "taxid": 1658765, "species_taxid": 1658765, "relation_to_type": "type", "validated": true, "ani": 76.186, "matched_fragments": 75, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marinobacterium arenosum", "strain": "strain=CAU 1594", "accession": "GCA_019795155.1", "taxid": 2862496, "species_taxid": 2862496, "relation_to_type": "type", "validated": true, "ani": 76.0683, "matched_fragments": 86, "total_fragments": 1461, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 91.67, "contamination": 1.56, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_000410875.1", "gtdb_species": "s__Pseudomonas_D pelagia", "ani": 99.3095, "matched_fragments": 1322, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_008365385.1", "gtdb_species": "s__Pseudomonas_D laoshanensis", "ani": 83.4001, "matched_fragments": 896, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.00", "min_intra_species_ani": "95.95", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009497895.1", "gtdb_species": "s__Pseudomonas_D pelagia_A", "ani": 83.2373, "matched_fragments": 928, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002840055.1", "gtdb_species": "s__Pseudomonas_D sp002840055", "ani": 79.5879, "matched_fragments": 401, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008641105.1", "gtdb_species": "s__Pseudomonas_D salina", "ani": 79.3199, "matched_fragments": 508, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_016763285.1", "gtdb_species": "s__Pseudomonas_D sp016763285", "ani": 78.9447, "matched_fragments": 395, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003797905.1", "gtdb_species": "s__Pseudomonas_D sp002683975", "ani": 78.7612, "matched_fragments": 370, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.94", "min_intra_species_ani": "98.05", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.90", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_900105255.1", "gtdb_species": "s__Pseudomonas_D sabulinigri", "ani": 78.6077, "matched_fragments": 431, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003444685.1", "gtdb_species": "s__Pseudomonas_D gallaeciensis", "ani": 78.268, "matched_fragments": 432, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.87", "min_intra_species_ani": "97.82", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.85", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_019116555.1", "gtdb_species": "s__Pseudomonas_D excrementavium", "ani": 78.2567, "matched_fragments": 304, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000826105.1", "gtdb_species": "s__Pseudomonas_E massiliensis", "ani": 76.8342, "matched_fragments": 143, "total_fragments": 1461, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }