{ "tc_result": [ { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_012986145.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 91.9809, "matched_fragments": 1115, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas peli", "strain": "strain=DSM 17833", "accession": "GCA_900099645.1", "taxid": 592361, "species_taxid": 592361, "relation_to_type": "type", "validated": true, "ani": 91.9709, "matched_fragments": 1125, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guineae", "strain": "strain=LMG 24016", "accession": "GCA_900113745.1", "taxid": 425504, "species_taxid": 425504, "relation_to_type": "type", "validated": true, "ani": 83.9648, "matched_fragments": 919, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cuatrocienegasensis", "strain": "strain=CIP 109853", "accession": "GCA_900110925.1", "taxid": 543360, "species_taxid": 543360, "relation_to_type": "type", "validated": true, "ani": 82.6317, "matched_fragments": 796, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas tumuqii", "strain": "strain=LAMW06", "accession": "GCA_013184545.1", "taxid": 2715755, "species_taxid": 2715755, "relation_to_type": "type", "validated": true, "ani": 82.4798, "matched_fragments": 820, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas borbori", "strain": "strain=DSM 17834", "accession": "GCA_900115555.1", "taxid": 289003, "species_taxid": 289003, "relation_to_type": "type", "validated": true, "ani": 82.4623, "matched_fragments": 805, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas benzenivorans", "strain": "strain=DSM 8628", "accession": "GCA_900100495.1", "taxid": 556533, "species_taxid": 556533, "relation_to_type": "type", "validated": true, "ani": 82.3105, "matched_fragments": 879, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 81.9835, "matched_fragments": 772, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas guguanensis", "strain": "strain=JCM 18416", "accession": "GCA_900104265.1", "taxid": 1198456, "species_taxid": 1198456, "relation_to_type": "type", "validated": true, "ani": 81.6547, "matched_fragments": 826, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ullengensis", "strain": "strain=UL070", "accession": "GCA_014174475.1", "taxid": 2759166, "species_taxid": 2759166, "relation_to_type": "type", "validated": true, "ani": 81.4699, "matched_fragments": 743, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas yangonensis", "strain": "strain=MY50", "accession": "GCA_009932725.1", "taxid": 2579922, "species_taxid": 2579922, "relation_to_type": "type", "validated": true, "ani": 81.1595, "matched_fragments": 769, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 80.9831, "matched_fragments": 714, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 80.8288, "matched_fragments": 683, "total_fragments": 1246, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 62.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900099645.1", "gtdb_species": "s__Pseudomonas_E peli", "ani": 91.9709, "matched_fragments": 1125, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.85", "min_intra_species_ani": "96.04", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.85", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_002840155.1", "gtdb_species": "s__Pseudomonas_E sp002840155", "ani": 90.3057, "matched_fragments": 1116, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105355.1", "gtdb_species": "s__Pseudomonas_E anguilliseptica", "ani": 89.4369, "matched_fragments": 1055, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.12", "min_intra_species_ani": "96.12", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018827205.1", "gtdb_species": "s__Pseudomonas_E sp018827205", "ani": 88.0251, "matched_fragments": 983, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.54", "min_intra_species_ani": "99.51", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003060885.1", "gtdb_species": "s__Pseudomonas_E sp003060885", "ani": 87.4875, "matched_fragments": 1009, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018816095.1", "gtdb_species": "s__Pseudomonas_E sp018816095", "ani": 85.3973, "matched_fragments": 856, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.20", "min_intra_species_ani": "96.15", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.82", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_004920405.1", "gtdb_species": "s__Pseudomonas_E leptonychotis", "ani": 85.0871, "matched_fragments": 1025, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001465025.1", "gtdb_species": "s__Pseudomonas_E sp001465025", "ani": 84.1506, "matched_fragments": 838, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.96", "min_intra_species_ani": "95.96", "mean_intra_species_af": "0.61", "min_intra_species_af": "0.61", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002354655.1", "gtdb_species": "s__Pseudomonas_E sp002354655", "ani": 83.7328, "matched_fragments": 900, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.84", "min_intra_species_ani": "99.84", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.95", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_009763245.1", "gtdb_species": "s__Pseudomonas_E sp009763245", "ani": 83.3189, "matched_fragments": 834, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900100495.1", "gtdb_species": "s__Pseudomonas_E benzenivorans", "ani": 82.3161, "matched_fragments": 878, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902506505.1", "gtdb_species": "s__Pseudomonas_E sp902506505", "ani": 81.8693, "matched_fragments": 756, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.45", "min_intra_species_ani": "95.45", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014851905.1", "gtdb_species": "s__Pseudomonas_E sp014851905", "ani": 81.4775, "matched_fragments": 709, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000761545.1", "gtdb_species": "s__Pseudomonas_E sp000761545", "ani": 81.1459, "matched_fragments": 725, "total_fragments": 1246, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }