{ "tc_result": [ { "organism_name": "Pseudomonas marincola", "strain": "strain=JCM 14761", "accession": "GCA_900116605.1", "taxid": 437900, "species_taxid": 437900, "relation_to_type": "type", "validated": true, "ani": 97.6531, "matched_fragments": 1414, "total_fragments": 1516, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas segetis", "strain": "strain=CIP 108523", "accession": "GCA_900188155.1", "taxid": 298908, "species_taxid": 298908, "relation_to_type": "type", "validated": true, "ani": 80.0269, "matched_fragments": 700, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas borbori", "strain": "strain=DSM 17834", "accession": "GCA_900115555.1", "taxid": 289003, "species_taxid": 289003, "relation_to_type": "type", "validated": true, "ani": 79.9195, "matched_fragments": 660, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas benzenivorans", "strain": "strain=DSM 8628", "accession": "GCA_900100495.1", "taxid": 556533, "species_taxid": 556533, "relation_to_type": "type", "validated": true, "ani": 79.5302, "matched_fragments": 681, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas taeanensis", "strain": "strain=MS-3", "accession": "GCA_000498575.2", "taxid": 574962, "species_taxid": 574962, "relation_to_type": "type", "validated": true, "ani": 79.5243, "matched_fragments": 632, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas tumuqii", "strain": "strain=LAMW06", "accession": "GCA_013184545.1", "taxid": 2715755, "species_taxid": 2715755, "relation_to_type": "type", "validated": true, "ani": 79.5195, "matched_fragments": 685, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas hydrolytica", "strain": "strain=DSWY01", "accession": "GCA_021495345.2", "taxid": 2493633, "species_taxid": 2493633, "relation_to_type": "type", "validated": true, "ani": 79.3087, "matched_fragments": 597, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 79.1942, "matched_fragments": 630, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernae", "strain": "strain=K2W31S-8", "accession": "GCA_003595175.1", "taxid": 2320867, "species_taxid": 2320867, "relation_to_type": "type", "validated": true, "ani": 79.1616, "matched_fragments": 533, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas campi", "strain": "strain=S1-A32-2", "accession": "GCA_013200955.2", "taxid": 2731681, "species_taxid": 2731681, "relation_to_type": "type", "validated": true, "ani": 79.0747, "matched_fragments": 543, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas argentinensis", "strain": "strain=LMG 22563", "accession": "GCA_900113905.1", "taxid": 289370, "species_taxid": 289370, "relation_to_type": "type", "validated": true, "ani": 79.0735, "matched_fragments": 540, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas argentinensis", "strain": "strain=CCUG 50743", "accession": "GCA_008801645.1", "taxid": 289370, "species_taxid": 289370, "relation_to_type": "type", "validated": true, "ani": 79.0529, "matched_fragments": 542, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas ullengensis", "strain": "strain=UL070", "accession": "GCA_014174475.1", "taxid": 2759166, "species_taxid": 2759166, "relation_to_type": "type", "validated": true, "ani": 79.0445, "matched_fragments": 582, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas punonensis", "strain": "strain=CECT 8089", "accession": "GCA_900142655.1", "taxid": 1220495, "species_taxid": 1220495, "relation_to_type": "type", "validated": true, "ani": 79.0172, "matched_fragments": 560, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas jessenii", "strain": "strain=DSM 17150", "accession": "GCA_002236115.1", "taxid": 77298, "species_taxid": 77298, "relation_to_type": "suspected-type", "validated": true, "ani": 78.7976, "matched_fragments": 526, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas hamedanensis", "strain": "strain=SWRI65", "accession": "GCA_014268595.2", "taxid": 2745504, "species_taxid": 2745504, "relation_to_type": "type", "validated": true, "ani": 78.7859, "matched_fragments": 500, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 78.7218, "matched_fragments": 568, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lurida", "strain": "strain=LMG 21995", "accession": "GCA_002563895.1", "taxid": 244566, "species_taxid": 244566, "relation_to_type": "type", "validated": true, "ani": 78.677, "matched_fragments": 446, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas protegens", "strain": "strain=CHA0", "accession": "GCA_000397205.1", "taxid": 380021, "species_taxid": 380021, "relation_to_type": "type", "validated": true, "ani": 78.6522, "matched_fragments": 508, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas protegens", "strain": "strain=CHA0", "accession": "GCA_900560965.1", "taxid": 380021, "species_taxid": 380021, "relation_to_type": "type", "validated": true, "ani": 78.6224, "matched_fragments": 508, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas trivialis", "strain": "strain=DSM 14937", "accession": "GCA_001439805.1", "taxid": 200450, "species_taxid": 200450, "relation_to_type": "type", "validated": true, "ani": 78.5888, "matched_fragments": 471, "total_fragments": 1516, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 62.5, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900116605.1", "gtdb_species": "s__Pseudomonas_E marincola", "ani": 97.6531, "matched_fragments": 1414, "total_fragments": 1516, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }