{
    "type": "genome",
    "identifier": "GCA_001439385.1",
    "organism": "Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69",
    "title": "Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Kungliga Tekniska Hogskolan",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_001439385.1",
        "bioproject": "PRJNA273799",
        "biosample": "SAMN03742026",
        "wgs_master": "LIDN00000000.1",
        "refseq_category": "na",
        "taxid": "1655635",
        "species_taxid": "1655635",
        "organism_name": "Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69",
        "infraspecific_name": "",
        "isolate": "BACL9 MAG-120924-bin69",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2015/11/06",
        "asm_name": "ASM143938v1",
        "submitter": "Kungliga Tekniska Hogskolan",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/439/385/GCA_001439385.1_ASM143938v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2015-11-06",
    "dateModified": "2015-11-06",
    "datePublished": "2015-11-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Verrucomicrobia subdivision 6 bacterium BACL9 MAG-120924-bin69"
        ],
        "sample_taxid": [
            "1655635"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Baltic Sea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.426 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 112.0,
            "max": 112.0
        },
        "completeness": 86.66,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1485032",
        "Number of Sequences": "474",
        "Longest Sequences (bp)": "15584",
        "N50 (bp)": "4003",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.4",
        "Number of CDSs": "1074",
        "Average Protein Length": "283.0",
        "Coding Ratio (%)": "61.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 86.66,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001438005.1",
                "gtdb_species": "s__UBA3015 sp001438005",
                "ani": 98.5513,
                "matched_fragments": 192,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Methylacidiphilales;f__UBA3015;g__UBA3015",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.83",
                "min_intra_species_ani": "98.60",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 6,
                "status": "conclusive"
            },
            {
                "accession": "GCA_009927835.1",
                "gtdb_species": "s__UBA3015 sp002367435",
                "ani": 78.4052,
                "matched_fragments": 99,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Methylacidiphilales;f__UBA3015;g__UBA3015",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.27",
                "min_intra_species_ani": "99.08",
                "mean_intra_species_af": "0.77",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_903956835.1",
                "gtdb_species": "s__UBA3015 sp903956835",
                "ani": 78.2105,
                "matched_fragments": 102,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Methylacidiphilales;f__UBA3015;g__UBA3015",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.86",
                "min_intra_species_ani": "98.22",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_903905395.1",
                "gtdb_species": "s__UBA3015 sp903905395",
                "ani": 76.8319,
                "matched_fragments": 59,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Methylacidiphilales;f__UBA3015;g__UBA3015",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.69",
                "min_intra_species_ani": "99.69",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Methylacidiphilales",
        "f__UBA3015",
        "g__UBA3015",
        "s__UBA3015 sp001438005"
    ],
    "_genome_taxon": [
        "Verrucomicrobia",
        "subdivision",
        "6",
        "bacterium",
        "BACL9",
        "MAG-120924-bin69",
        "d__Bacteria",
        "p__Verrucomicrobiota",
        "c__Verrucomicrobiae",
        "o__Methylacidiphilales",
        "f__UBA3015",
        "g__UBA3015",
        "s__UBA3015 sp001438005",
        "Bacteria",
        "Verrucomicrobiota",
        "Verrucomicrobiae",
        "Methylacidiphilales",
        "UBA3015",
        "UBA3015",
        "UBA3015",
        "sp001438005"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}