{ "type": "genome", "identifier": "GCA_001705955.1", "organism": "Pseudomonas sp. CO183", "title": "Pseudomonas sp. CO183", "description": "derived from metagenome; metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Calgary", "publication": [ {} ], "properties": { "assembly_accession": "GCA_001705955.1", "bioproject": "PRJNA183510", "biosample": "SAMN05430256", "wgs_master": "MCNJ00000000.1", "refseq_category": "na", "taxid": "1883453", "species_taxid": "1883453", "organism_name": "Pseudomonas sp. CO183", "infraspecific_name": "", "isolate": "CO183", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2016/08/17", "asm_name": "ASM170595v1", "submitter": "University of Calgary", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/705/955/GCA_001705955.1_ASM170595v1", "excluded_from_refseq": "derived from metagenome; metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2016-08-17", "dateModified": "2016-08-17", "datePublished": "2016-08-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas sp. CO183" ], "sample_taxid": [ "1883453" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Alberta" ], "sample_host_location_id": [], "data_size": "1.263 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4522469", "Number of Sequences": "117", "Longest Sequences (bp)": "280110", "N50 (bp)": "74098", "Gap Ratio (%)": "0.000420", "GCcontent (%)": "63.0", "Number of CDSs": "4171", "Average Protein Length": "317.8", "Coding Ratio (%)": "87.9", "Number of rRNAs": "3", "Number of tRNAs": "62", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pseudomonas songnenensis", "strain": "strain=NEAU-ST5-5", 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