{
    "type": "genome",
    "identifier": "GCA_001773895.1",
    "organism": "Candidatus Aminicenantes bacterium RBG_16_63_16",
    "title": "Candidatus Aminicenantes bacterium RBG_16_63_16",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Banfield Lab, University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_001773895.1",
        "bioproject": "PRJNA288027",
        "biosample": "SAMN04313724",
        "wgs_master": "MEYB00000000.1",
        "refseq_category": "na",
        "taxid": "1797273",
        "species_taxid": "1797273",
        "organism_name": "Candidatus Aminicenantes bacterium RBG_16_63_16",
        "infraspecific_name": "",
        "isolate": "",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/10/18",
        "asm_name": "ASM177389v1",
        "submitter": "Banfield Lab, University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/773/895/GCA_001773895.1_ASM177389v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-10-18",
    "dateModified": "2016-10-18",
    "datePublished": "2016-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Aminicenantes bacterium RBG_16_63_16"
        ],
        "sample_taxid": [
            "1797273"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Rifle, CO"
        ],
        "sample_host_location_id": [],
        "data_size": "1.269 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.45,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4526823",
        "Number of Sequences": "130",
        "Longest Sequences (bp)": "161035",
        "N50 (bp)": "51885",
        "Gap Ratio (%)": "0.491183",
        "GCcontent (%)": "62.4",
        "Number of CDSs": "3509",
        "Average Protein Length": "376.5",
        "Coding Ratio (%)": "87.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Actinomadura rupiterrae",
                "strain": "strain=DSM 45251",
                "accession": "GCA_024172125.1",
                "taxid": 559627,
                "species_taxid": 559627,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.742,
                "matched_fragments": 76,
                "total_fragments": 1441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mycolicibacterium chubuense",
                "strain": "strain=DSM 44219",
                "accession": "GCA_002086595.1",
                "taxid": 1800,
                "species_taxid": 1800,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7354,
                "matched_fragments": 51,
                "total_fragments": 1441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oharaeibacter diazotrophicus",
                "strain": "strain=DSM 102969",
                "accession": "GCA_004362745.1",
                "taxid": 1920512,
                "species_taxid": 1920512,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7314,
                "matched_fragments": 80,
                "total_fragments": 1441,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomadura roseirufa",
                "strain": "",
                "accession": "GCA_900659635.1",
                "taxid": 2094049,
                "species_taxid": 2094049,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6456,
                "matched_fragments": 76,
                "total_fragments": 1441,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.45,
            "contamination": 8.33,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_014894455.1",
                "gtdb_species": "s__RBG-16-66-30 sp014894455",
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                "matched_fragments": 254,
                "total_fragments": 1441,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001775755.1",
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                "matched_fragments": 237,
                "total_fragments": 1441,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.12",
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                "mean_intra_species_af": "0.81",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_003524335.1",
                "gtdb_species": "s__UBA8522 sp003524335",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA8522;g__UBA8522",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_017883305.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017886205.1",
                "gtdb_species": "s__UBA8522 sp017886205",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA8522;g__UBA8522",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_016867635.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__RBG-16-66-30;g__RBG-16-66-30",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Aminicenantia;o__Aminicenantales;f__UBA4085;g__FEN-413",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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            {
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            {
                "accession": "GCA_016931595.1",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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        "p__Acidobacteriota",
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        "f__UBA8522",
        "g__",
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    "_genome_taxon": [
        "Candidatus",
        "Aminicenantes",
        "bacterium",
        "RBG_16_63_16",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Aminicenantia",
        "o__Aminicenantales",
        "f__UBA8522",
        "g__",
        "s__",
        "Bacteria",
        "Acidobacteriota",
        "Aminicenantia",
        "Aminicenantales",
        "UBA8522",
        "g",
        "",
        "",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0001480",
            "label": "subsurface"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}