{
    "type": "genome",
    "identifier": "GCA_001830865.1",
    "organism": "Tenericutes bacterium GWC2_34_14",
    "title": "Tenericutes bacterium GWC2_34_14",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Banfield Lab, University of California, Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_001830865.1",
        "bioproject": "PRJNA288027",
        "biosample": "SAMN04313966",
        "wgs_master": "MICR00000000.1",
        "refseq_category": "na",
        "taxid": "1802346",
        "species_taxid": "1802346",
        "organism_name": "Tenericutes bacterium GWC2_34_14",
        "infraspecific_name": "",
        "isolate": "",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/10/21",
        "asm_name": "ASM183086v1",
        "submitter": "Banfield Lab, University of California, Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/830/865/GCA_001830865.1_ASM183086v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-10-21",
    "dateModified": "2016-10-21",
    "datePublished": "2016-10-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Tenericutes bacterium GWC2_34_14"
        ],
        "sample_taxid": [
            "1802346"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Rifle, CO"
        ],
        "sample_host_location_id": [],
        "data_size": "0.602 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2155962",
        "Number of Sequences": "18",
        "Longest Sequences (bp)": "464633",
        "N50 (bp)": "282570",
        "Gap Ratio (%)": "0.003200",
        "GCcontent (%)": "34.6",
        "Number of CDSs": "2045",
        "Average Protein Length": "325.1",
        "Coding Ratio (%)": "92.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "39",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Mariniplasma anaerobium",
                "strain": "strain=Mahy22",
                "accession": "GCA_016865445.1",
                "taxid": 2735436,
                "species_taxid": 2735436,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.1283,
                "matched_fragments": 100,
                "total_fragments": 711,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001830045.1",
                "gtdb_species": "s__UBA2284 sp001830045",
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                "matched_fragments": 625,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.56",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 16,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002418725.1",
                "gtdb_species": "s__UBA2284 sp002418725",
                "ani": 81.7441,
                "matched_fragments": 370,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.77",
                "min_intra_species_ani": "99.77",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002839095.1",
                "gtdb_species": "s__UBA2284 sp002839095",
                "ani": 79.2398,
                "matched_fragments": 196,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002424575.1",
                "gtdb_species": "s__UBA2284 sp002424575",
                "ani": 78.6686,
                "matched_fragments": 205,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016934015.1",
                "gtdb_species": "s__UBA6181 sp016934015",
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                "matched_fragments": 95,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA6181",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_003605085.1",
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                "matched_fragments": 168,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002345705.1",
                "gtdb_species": "s__UBA2284 sp002345705",
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                "matched_fragments": 134,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002838185.1",
                "gtdb_species": "s__MZ-XQ sp002838185",
                "ani": 77.6074,
                "matched_fragments": 133,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__MZ-XQ",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018817915.1",
                "gtdb_species": "s__UBA2284 sp018817915",
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                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_006226985.1",
                "gtdb_species": "s__UBA2284 sp006226985",
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                "matched_fragments": 125,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002838205.1",
                "gtdb_species": "s__MZ-XQ sp002838205",
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                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__MZ-XQ",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003249785.1",
                "gtdb_species": "s__UBA2284 sp003249785",
                "ani": 77.2751,
                "matched_fragments": 94,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016934175.1",
                "gtdb_species": "s__UBA2284 sp016934175",
                "ani": 77.133,
                "matched_fragments": 93,
                "total_fragments": 711,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Acholeplasmatales;f__Acholeplasmataceae;g__UBA2284",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Acholeplasmatales",
        "f__Acholeplasmataceae",
        "g__UBA2284",
        "s__UBA2284 sp001830045"
    ],
    "_genome_taxon": [
        "Tenericutes",
        "bacterium",
        "GWC2_34_14",
        "d__Bacteria",
        "p__Bacillota_I",
        "c__Bacilli_A",
        "o__Acholeplasmatales",
        "f__Acholeplasmataceae",
        "g__UBA2284",
        "s__UBA2284 sp001830045",
        "Bacteria",
        "Bacillota",
        "I",
        "Bacilli",
        "A",
        "Acholeplasmatales",
        "Acholeplasmataceae",
        "UBA2284",
        "UBA2284",
        "sp001830045"
    ],
    "_meo": [
        {
            "id": "MEO_0001480",
            "label": "subsurface"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}