{
    "type": "genome",
    "identifier": "GCA_001875355.1",
    "organism": "Marine Group III euryarchaeote CG-Epi3",
    "title": "Marine Group III euryarchaeote CG-Epi3",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Universidad Miguel Hernandez, Evolutionary Genomics Group",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_001875355.1",
        "bioproject": "PRJNA335308",
        "biosample": "SAMN05509051",
        "wgs_master": "MIYY00000000.1",
        "refseq_category": "na",
        "taxid": "1888997",
        "species_taxid": "1888997",
        "organism_name": "Marine Group III euryarchaeote CG-Epi3",
        "infraspecific_name": "",
        "isolate": "CG-Epi3",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/11/10",
        "asm_name": "ASM187535v1",
        "submitter": "Universidad Miguel Hernandez, Evolutionary Genomics Group",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/875/355/GCA_001875355.1_ASM187535v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-11-10",
    "dateModified": "2016-11-10",
    "datePublished": "2016-11-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Marine Group III euryarchaeote CG-Epi3"
        ],
        "sample_taxid": [
            "1888997"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.223 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "790833",
        "Number of Sequences": "30",
        "Longest Sequences (bp)": "71763",
        "N50 (bp)": "28243",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "35.9",
        "Number of CDSs": "700",
        "Average Protein Length": "340.7",
        "Coding Ratio (%)": "90.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "23",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 58.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002497685.1",
                "gtdb_species": "s__CG-Epi1 sp002497685",
                "ani": 99.5283,
                "matched_fragments": 154,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.79",
                "min_intra_species_ani": "99.79",
                "mean_intra_species_af": "0.70",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002718915.1",
                "gtdb_species": "s__CG-Epi1 sp002718915",
                "ani": 82.5142,
                "matched_fragments": 151,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016845825.1",
                "gtdb_species": "s__CG-Epi1 sp016845825",
                "ani": 81.8783,
                "matched_fragments": 145,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001875345.1",
                "gtdb_species": "s__CG-Epi1 sp001875345",
                "ani": 81.689,
                "matched_fragments": 169,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001875365.1",
                "gtdb_species": "s__CG-Epi1 sp001875365",
                "ani": 80.7771,
                "matched_fragments": 112,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002724775.1",
                "gtdb_species": "s__CG-Epi1 sp002724775",
                "ani": 79.9638,
                "matched_fragments": 142,
                "total_fragments": 249,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__MGIII;f__CG-Epi1;g__CG-Epi1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.65",
                "min_intra_species_ani": "95.92",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__MGIII",
        "f__CG-Epi1",
        "g__CG-Epi1",
        "s__CG-Epi1 sp002497685"
    ],
    "_genome_taxon": [
        "Marine",
        "Group",
        "III",
        "euryarchaeote",
        "CG-Epi3",
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__MGIII",
        "f__CG-Epi1",
        "g__CG-Epi1",
        "s__CG-Epi1 sp002497685",
        "Archaea",
        "Thermoplasmatota",
        "Poseidoniia",
        "MGIII",
        "CG-Epi1",
        "CG-Epi1",
        "CG-Epi1",
        "sp002497685"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}