{
    "type": "genome",
    "identifier": "GCA_001899385.1",
    "organism": "Candidatus Caenarcanum bioreactoricola",
    "title": "Candidatus Caenarcanum bioreactoricola",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_001899385.1",
        "bioproject": "PRJNA347483",
        "biosample": "SAMN05890507",
        "wgs_master": "MOYB00000000.1",
        "refseq_category": "na",
        "taxid": "1906166",
        "species_taxid": "1906166",
        "organism_name": "Candidatus Caenarcanum bioreactoricola",
        "infraspecific_name": "",
        "isolate": "UASB_169",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2016/12/09",
        "asm_name": "ASM189938v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/899/385/GCA_001899385.1_ASM189938v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2016-12-09",
    "dateModified": "2016-12-09",
    "datePublished": "2016-12-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Caenarcanum bioreactoricola"
        ],
        "sample_taxid": [
            "1906166"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Japan"
        ],
        "sample_host_location_id": [],
        "data_size": "0.474 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1841220",
        "Number of Sequences": "67",
        "Longest Sequences (bp)": "318546",
        "N50 (bp)": "258789",
        "Gap Ratio (%)": "5.600254",
        "GCcontent (%)": "27.6",
        "Number of CDSs": "1784",
        "Average Protein Length": "284.9",
        "Coding Ratio (%)": "82.8",
        "Number of rRNAs": "2",
        "Number of tRNAs": "41",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Romboutsia timonensis",
                "strain": "strain=Marseille-P326",
                "accession": "GCA_900106845.1",
                "taxid": 1776391,
                "species_taxid": 1776391,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3185,
                "matched_fragments": 56,
                "total_fragments": 581,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fusobacterium hwasookii",
                "strain": "strain=KCOM 1249",
                "accession": "GCA_014217355.1",
                "taxid": 1583098,
                "species_taxid": 1583098,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1633,
                "matched_fragments": 54,
                "total_fragments": 581,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fusobacterium hwasookii",
                "strain": "strain=ChDC F128",
                "accession": "GCA_000292935.1",
                "taxid": 1583098,
                "species_taxid": 1583098,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0169,
                "matched_fragments": 54,
                "total_fragments": 581,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium cavendishii",
                "strain": "strain=DSM 21758",
                "accession": "GCA_900141845.1",
                "taxid": 349931,
                "species_taxid": 349931,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8549,
                "matched_fragments": 77,
                "total_fragments": 581,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001899385.1",
                "gtdb_species": "s__Caenarcanum bioreactoricola",
                "ani": 99.9977,
                "matched_fragments": 554,
                "total_fragments": 581,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Caenarcaniphilales;f__Caenarcanaceae;g__Caenarcanum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_016744535.1",
                "gtdb_species": "s__BB28 sp016744535",
                "ani": 74.8989,
                "matched_fragments": 71,
                "total_fragments": 581,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__BB28;g__BB28",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013215945.1",
                "gtdb_species": "s__NORP36 sp004566295",
                "ani": 74.7323,
                "matched_fragments": 56,
                "total_fragments": 581,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__NORP36",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.94",
                "min_intra_species_ani": "99.94",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Vampirovibrionia",
        "o__Caenarcaniphilales",
        "f__Caenarcanaceae",
        "g__Caenarcanum",
        "s__Caenarcanum bioreactoricola"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Caenarcanum",
        "bioreactoricola",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Vampirovibrionia",
        "o__Caenarcaniphilales",
        "f__Caenarcanaceae",
        "g__Caenarcanum",
        "s__Caenarcanum bioreactoricola",
        "Bacteria",
        "Cyanobacteriota",
        "Vampirovibrionia",
        "Caenarcaniphilales",
        "Caenarcanaceae",
        "Caenarcanum",
        "Caenarcanum",
        "bioreactoricola"
    ],
    "_meo": [
        {
            "id": "MEO_0000119",
            "label": "bioreactor"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}