{ "tc_result": [ { "organism_name": "Pseudomonas saudiphocaensis", "strain": "strain=20_BN", "accession": "GCA_000756775.2", "taxid": 1499686, "species_taxid": 1499686, "relation_to_type": "type", "validated": true, "ani": 84.6973, "matched_fragments": 129, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas nitrititolerans", "strain": "strain=GL14", "accession": "GCA_003696285.1", "taxid": 2482751, "species_taxid": 2482751, "relation_to_type": "type", "validated": true, "ani": 83.3596, "matched_fragments": 122, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=FDAARGOS_875", "accession": "GCA_016028655.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 82.4436, "matched_fragments": 119, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas stutzeri", "strain": "strain=CGMCC 1.1803", "accession": "GCA_000219605.1", "taxid": 316, "species_taxid": 316, "relation_to_type": "type", "validated": true, "ani": 82.4324, "matched_fragments": 118, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=FDAARGOS_877", "accession": "GCA_016028515.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 81.9626, "matched_fragments": 110, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_002890935.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 81.9586, "matched_fragments": 109, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas frequens", "strain": "strain=DNSP21", "accession": "GCA_024448335.1", "taxid": 2968969, "species_taxid": 2968969, "relation_to_type": "type", "validated": true, "ani": 81.9586, "matched_fragments": 109, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas songnenensis", "strain": "strain=NEAU-ST5-5", "accession": "GCA_003696315.1", "taxid": 1176259, "species_taxid": 1176259, "relation_to_type": "type", "validated": true, "ani": 81.935, "matched_fragments": 103, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas songnenensis", "strain": "strain=DSM 27560T", "accession": "GCA_024448495.1", "taxid": 1176259, "species_taxid": 1176259, "relation_to_type": "type", "validated": true, "ani": 81.9067, "matched_fragments": 103, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_024328335.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 81.0798, "matched_fragments": 106, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Stutzerimonas xanthomarina", "strain": "strain=DSM 18231", "accession": "GCA_900129835.1", "taxid": 271420, "species_taxid": 271420, "relation_to_type": "suspected-type", "validated": true, "ani": 81.0533, "matched_fragments": 108, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] nosocomialis", "strain": "strain=A31/70", "accession": "GCA_005876855.1", "taxid": 1056496, "species_taxid": 1056496, "relation_to_type": "type", "validated": true, "ani": 80.8294, "matched_fragments": 101, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas aromaticivorans", "strain": "strain=MAP12", "accession": "GCA_019097855.1", "taxid": 2849492, "species_taxid": 2849492, "relation_to_type": "type", "validated": true, "ani": 80.8027, "matched_fragments": 66, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas lalucatii", "strain": "strain=R1b54", "accession": "GCA_018398425.1", "taxid": 1424203, "species_taxid": 1424203, "relation_to_type": "type", "validated": true, "ani": 80.3209, "matched_fragments": 85, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azotobacter beijerinckii", "strain": "strain=DSM 378", "accession": "GCA_900110885.1", "taxid": 170623, "species_taxid": 170623, "relation_to_type": "type", "validated": true, "ani": 80.1831, "matched_fragments": 70, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Pseudomonas] zhaodongensis", "strain": "strain=DSM 27559T", "accession": "GCA_024448735.1", "taxid": 1176257, "species_taxid": 1176257, "relation_to_type": "suspected-type", "validated": true, "ani": 80.0742, "matched_fragments": 97, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 79.8124, "matched_fragments": 79, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas kuykendallii", "strain": "strain=NRRL B-59562", "accession": "GCA_900106975.1", "taxid": 1007099, "species_taxid": 1007099, "relation_to_type": "type", "validated": true, "ani": 79.745, "matched_fragments": 85, "total_fragments": 168, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 43.63, "contamination": 1.52, "strain_heterogeneity": 50.0 }, "gtdb_result": [ { "accession": "GCA_002331645.1", "gtdb_species": "s__Pseudomonas_A stutzeri_T", "ani": 98.091, "matched_fragments": 142, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.46", "min_intra_species_ani": "98.46", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_013522825.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AK", "ani": 88.417, "matched_fragments": 143, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002345575.1", "gtdb_species": "s__Pseudomonas_A stutzeri_S", "ani": 85.3773, "matched_fragments": 138, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000756775.1", "gtdb_species": "s__Pseudomonas_A saudiphocaensis", "ani": 84.6973, "matched_fragments": 129, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.10", "min_intra_species_ani": "98.10", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002890915.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AF", "ani": 82.1798, "matched_fragments": 122, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.35", "min_intra_species_ani": "98.08", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004331835.1", "gtdb_species": "s__Pseudomonas_A sp004331835", "ani": 81.7094, "matched_fragments": 112, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.93", "min_intra_species_ani": "97.83", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.91", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_002339675.1", "gtdb_species": "s__Pseudomonas_A stutzeri_O", "ani": 81.2777, "matched_fragments": 113, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_019090095.1", "gtdb_species": "s__Pseudomonas_A stutzeri_AN", "ani": 81.1859, "matched_fragments": 106, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000235745.1", "gtdb_species": "s__Pseudomonas_A stutzeri_H", "ani": 80.9567, "matched_fragments": 104, "total_fragments": 168, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }