# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00020	sequence01:1612..2235(+)	partial			WP_165992825.1	IS3 family transposase	86.0	47.0	41.3
MGA_5	LOCUS_00040	sequence01:3152..3790(-)	partial			WP_011102960.1	DEAD/DEAH box helicase family protein	63.7	8.6	45.0
MGA_56	LOCUS_00550	sequence01:52606..52923(-)	partial			WP_002985746.1	diacylglycerol kinase	90.5	70.4	72.6
MGA_59	LOCUS_00580	sequence01:55004..56695(+)	partial			WP_003854963.1	carboxylesterase/lipase family protein	35.3	36.8	43.3
MGA_71	LOCUS_00700	sequence01:66251..67768(+)	frameshift		67753	WP_080510938.1	alkaline phosphatase	85.5	82.7	46.0
MGA_109	LOCUS_01080	sequence01:98210..98398(-)	internal_stop_codon	98435..98437(-)		WP_010905879.1	oxidoreductase	100.0	23.0	77.4
MGA_110	LOCUS_01090	sequence01:98435..99025(-)	internal_stop_codon	98435..98437(-)		WP_011836413.1	oxidoreductase	99.5	70.9	80.0
MGA_113	LOCUS_01120	sequence01:100029..100385(-)	frameshift		100495	WP_000323650.1	NAD-dependent succinate-semialdehyde dehydrogenase	94.9	24.5	50.9
MGA_114	LOCUS_01130	sequence01:100382..101428(-)	frameshift		100474	WP_193385004.1	NAD-dependent succinate-semialdehyde dehydrogenase	92.0	68.9	46.9
MGA_127	LOCUS_01260	sequence02:11884..12081(-)	partial			WP_000427485.1	amino acid permease	100.0	14.2	72.3
MGA_141	LOCUS_01400	sequence02:24393..24992(-)	frameshift		25036	WP_003227109.1	amino acid ABC transporter substrate-binding protein	95.5	73.5	41.2
MGA_148	LOCUS_01470	sequence02:29378..29917(-)	frameshift		29410	WP_003243743.1	MmgE/PrpD family protein	82.1	33.3	41.6
MGA_157	LOCUS_01560	sequence02:38931..39521(-)	partial			WP_002360015.1	polyprenyl synthetase family protein	93.9	56.4	57.6
MGA_158	LOCUS_01570	sequence02:39666..39971(-)	frameshift,internal_stop_codon	40131..40133(-),40011..40013(-)	39698	WP_010964784.1	ABC transporter ATP-binding protein	90.1	35.4	71.4
MGA_159	LOCUS_01580	sequence02:40131..40391(-)	internal_stop_codon	40131..40133(-),40011..40013(-)		WP_002262422.1	betaine/proline/choline family ABC transporter ATP-binding protein	100.0	22.5	46.5
MGA_168	LOCUS_01670	sequence02:48972..49298(-)	frameshift		49423	WP_002263288.1	preQ(1) synthase	100.0	66.7	87.0
MGA_208	LOCUS_02070	sequence03:9341..10312(-)	partial			WP_010706863.1	DUF6287 domain-containing protein	39.0	47.4	36.4
MGA_252	LOCUS_02510	sequence03:54056..55390(-)	frameshift		55129,55099	WP_002991036.1	two-component system sensor histidine kinase CovS	89.4	80.4	37.9
MGA_274	LOCUS_02730	sequence03:76858..77721(-)	partial			WP_009966754.1	GIY-YIG nuclease family protein	93.0	66.8	31.6
MGA_287	LOCUS_02840	sequence04:11391..11825(+)	partial			WP_002262133.1	carbon-nitrogen family hydrolase	99.3	55.0	60.8
MGA_288	LOCUS_02850	sequence04:11838..12089(+)	internal_stop_codon	12087..12089(+)		WP_011100968.1	pyridoxal phosphate-dependent aminotransferase	97.6	20.7	63.0
MGA_289	LOCUS_02860	sequence04:12129..13031(+)	internal_stop_codon	12087..12089(+)		WP_003703454.1	pyridoxal phosphate-dependent aminotransferase	98.0	75.0	63.6
MGA_361	LOCUS_03570	sequence05:23968..24672(+)	partial			WP_012027022.1	PRD domain-containing protein	78.2	66.1	60.7
MGA_362	LOCUS_03580	sequence05:24714..24929(+)	partial			WP_002288633.1	glycosyl hydrolase 53 family protein	97.2	12.7	46.4
MGA_369	LOCUS_03650	sequence05:32763..34067(+)	internal_stop_codon	34065..34067(+)		WP_002262877.1	glucan 1,6-alpha-glucosidase DexB	100.0	81.0	80.9
MGA_430	LOCUS_04240	sequence06:28377..29324(+)	frameshift		29240	WP_002263109.1	ABC-F family ATP-binding cassette domain-containing protein	91.1	45.1	85.0
MGA_431	LOCUS_04250	sequence06:29239..30303(+)	frameshift		29249	WP_000584913.1	ABC-F family ATP-binding cassette domain-containing protein	95.2	54.1	70.6
MGA_433	LOCUS_04270	sequence06:30559..30939(+)	partial			WP_012583010.1	MarR family transcriptional regulator	83.3	71.7	32.4
MGA_434	LOCUS_04280	sequence06:30932..31756(+)	internal_stop_codon	31754..31756(+)		WP_010966684.1	ABC transporter ATP-binding protein	99.6	47.3	49.8
MGA_435	LOCUS_04290	sequence06:31778..32680(+)	internal_stop_codon	31754..31756(+)		WP_002681349.1	ABC transporter ATP-binding protein	93.0	48.1	63.1
MGA_449	LOCUS_04430	sequence06:45842..46279(+)	internal_stop_codon	45824..45826(+)		WP_011202637.1	carboxymuconolactone decarboxylase family protein	95.2	50.0	55.1
MGA_473	LOCUS_04670	sequence07:7356..7907(+)	internal_stop_codon	7353..7355(+)		WP_002262297.1	ABC transporter ATP-binding protein	98.4	72.6	72.8
MGA_474	LOCUS_04680	sequence07:7918..9282(+)	frameshift		9213	WP_010922559.1	ABC transporter permease	95.2	80.8	51.4
MGA_475	LOCUS_04690	sequence07:9270..9539(+)	frameshift		9213	WP_010922559.1	ABC transporter permease	91.0	14.9	45.1
MGA_501	LOCUS_04950	sequence07:37413..37727(+)	partial			WP_002263044.1	DNA-directed RNA polymerase subunit omega	71.2	70.5	91.9
MGA_514	LOCUS_05080	sequence07:51544..52620(+)	internal_stop_codon	51523..51525(+)		WP_002263026.1	DEAD/DEAH box helicase	100.0	82.7	67.0
MGA_515	LOCUS_05090	sequence07:52902..53282(+)	internal_stop_codon	52815..52817(+)		WP_000128291.1	ComF family protein	99.2	56.6	56.0
MGA_533	LOCUS_05260	sequence08:14382..14840(-)	partial			WP_157860219.1	isoprenylcysteine carboxylmethyltransferase family protein	89.5	60.8	39.0
MGA_540	LOCUS_05330	sequence08:21132..21890(+)	partial			WP_011461705.1	PLP-dependent aminotransferase family protein	92.9	49.4	40.9
MGA_574	LOCUS_05670	sequence09:43..585(-)	partial			WP_002261986.1	GBS Bsp-like repeat-containing protein	100.0	32.9	45.6
MGA_581	LOCUS_05740	sequence09:10233..11000(-)	partial			WP_002985176.1	ABC transporter ATP-binding protein	98.0	60.1	64.4
MGA_591	LOCUS_05830	sequence09:19295..19471(-)	partial			WP_000048058.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_592	LOCUS_05840	sequence09:19751..20044(-)	partial			WP_000610162.1	VOC family protein	87.6	67.5	38.8
MGA_644	LOCUS_06340	sequence10:20433..20705(-)	partial			WP_011074470.1	membrane protein	100.0	70.9	66.7
MGA_703	LOCUS_06920	sequence12:458..2035(+)	frameshift		1963	WP_002352208.1	2-hydroxyacyl-CoA dehydratase	91.0	33.4	83.7
MGA_704	LOCUS_06930	sequence12:2032..3090(+)	frameshift		1963	WP_002352208.1	2-hydroxyacyl-CoA dehydratase	98.9	24.0	89.1
MGA_731	LOCUS_07200	sequence13:1433..2509(+)	partial			WP_011837012.1	glycosyltransferase family 39 protein	95.8	67.4	43.5
MGA_759	LOCUS_07480	sequence13:31216..31713(-)	partial			WP_015613294.1	N-6 DNA methylase	100.0	17.0	62.4
MGA_760	LOCUS_07490	sequence13:31863..>33683(-)	frameshift		31961	WP_015613294.1	N-6 DNA methylase	96.4	63.4	56.6
MGA_763	LOCUS_07510	sequence14:806..1378(+)	frameshift		1318	WP_002263563.1	ferrous iron transport protein B	90.5	23.7	80.2
MGA_764	LOCUS_07520	sequence14:1366..2955(+)	frameshift		1324	WP_002263563.1	ferrous iron transport protein B	99.1	73.7	72.5
MGA_780	LOCUS_07680	sequence14:15739..16053(+)	partial			WP_005903515.1	metalloregulator ArsR/SmtB family transcription factor	89.4	74.4	41.9
MGA_781	LOCUS_07690	sequence14:16037..17932(+)	partial			WP_011459352.1	heavy metal translocating P-type ATPase	93.5	74.4	50.3
MGA_795	LOCUS_07830	sequence15:186..722(+)	internal_stop_codon	720..722(+)		WP_010921966.1	oleate hydratase	92.7	28.0	70.9
MGA_796	LOCUS_07840	sequence15:723..1949(+)	internal_stop_codon	720..722(+)		WP_001270889.1	oleate hydratase	99.8	69.5	66.3
MGA_797	LOCUS_07850	sequence15:2181..2474(+)	internal_stop_codon	2472..2474(+)		WP_000456288.1	hypothetical protein	100.0	59.5	59.8
MGA_823	LOCUS_08110	sequence16:144..614(+)	frameshift		114	WP_061603534.1	HAD family hydrolase	100.0	55.7	68.6
MGA_831	LOCUS_08190	sequence16:8346..9524(-)	partial			WP_010922656.1	restriction endonuclease subunit S	47.2	46.4	62.2
MGA_855	LOCUS_08410	sequence17:3896..6298(-)	partial			WP_164925492.1	pullulanase	99.0	37.7	61.6
MGA_879	LOCUS_08650	sequence17:27219..>27733(-)	partial			WP_000573797.1	sugar ABC transporter permease	100.0	56.1	48.9
MGA_880	LOCUS_08660	sequence18:63..722(-)	frameshift		738	WP_002262009.1	carbamoyl-phosphate synthase large subunit	100.0	20.7	83.6
MGA_881	LOCUS_08670	sequence18:706..3252(-)	frameshift		753	WP_002262009.1	carbamoyl-phosphate synthase large subunit	99.4	79.6	91.3
MGA_909	LOCUS_08950	sequence19:1532..1834(-)	internal_stop_codon	1532..1534(-)		WP_000282447.1	single-stranded DNA-binding protein	100.0	76.3	77.0
MGA_944	LOCUS_09300	sequence20:11504..11857(-)	partial			WP_011837648.1	helix-turn-helix transcriptional regulator	95.7	68.5	35.3
MGA_957	LOCUS_09430	sequence21:1079..1942(-)	partial			WP_002263013.1	hypothetical protein	57.8	74.9	46.2
MGA_972	LOCUS_09580	sequence21:14419..14655(+)	frameshift		14568	WP_002262057.1	tryptophan synthase subunit alpha	66.7	20.0	71.2
MGA_973	LOCUS_09590	sequence21:14574..15200(+)	frameshift		14568	WP_002262057.1	tryptophan synthase subunit alpha	99.0	79.2	72.3
MGA_985	LOCUS_09710	sequence21:26022..>26575(-)	partial			WP_000704662.1	site-specific integrase	96.7	45.6	55.9
MGA_986	LOCUS_09720	sequence22:1..996(+)	partial			WP_000863589.1	signal recognition particle protein	94.3	60.3	89.5
MGA_987	LOCUS_09730	sequence22:1291..1494(+)	partial			WP_011922396.1	DUF3307 domain-containing protein	98.5	26.8	80.3
MGA_993	LOCUS_09790	sequence22:4908..5216(+)	frameshift		4864	WP_011461242.1	energy-coupling factor ABC transporter ATP-binding protein	81.4	16.8	37.3
MGA_995	LOCUS_09810	sequence22:6800..7300(-)	internal_stop_codon	7310..7312(-)		WP_000620981.1	sensor histidine kinase	97.0	51.6	60.2
MGA_996	LOCUS_09820	sequence22:7310..7747(-)	internal_stop_codon	7310..7312(-)		WP_002263236.1	sensor histidine kinase	100.0	46.7	48.0
MGA_1003	LOCUS_09890	sequence22:16270..16839(-)	internal_stop_codon	16852..16854(-)		WP_001015240.1	DNA-processing protein DprA	99.5	67.1	76.6
MGA_1004	LOCUS_09900	sequence22:16852..17112(-)	internal_stop_codon	16852..16854(-)		WP_002262865.1	DNA-processing protein DprA	98.8	30.4	74.1
MGA_1010	LOCUS_09960	sequence22:21078..21434(-)	frameshift,internal_stop_codon	21610..21612(-)	21576,21450	WP_048065538.1	IS5-like element ISMac15 family transposase	97.5	43.2	39.0
MGA_1011	LOCUS_09970	sequence22:21610..21834(-)	frameshift,internal_stop_codon	21610..21612(-)	21576,21450	WP_011403385.1	IS5 family transposase	98.6	29.0	45.9
MGA_1012	LOCUS_09980	sequence22:21856..22554(+)	partial			WP_002279588.1	YfhO family protein	94.8	21.7	48.2
MGA_1014	LOCUS_10000	sequence22:23767..25725(-)	partial			WP_000656702.1	phage tail tip lysozyme	100.0	69.9	81.4
MGA_1034	LOCUS_10200	sequence23:18053..18361(+)	internal_stop_codon	18359..18361(+)		WP_011836473.1	beta-glucoside-specific PTS transporter subunit IIABC	95.1	15.1	53.6
MGA_1035	LOCUS_10210	sequence23:18383..18610(+)	frameshift,internal_stop_codon	18359..18361(+),18812..18814(+)	18580	WP_010964716.1	beta-glucoside-specific PTS transporter subunit IIABC	86.7	10.4	50.8
MGA_1036	LOCUS_10220	sequence23:18838..19116(+)	frameshift,internal_stop_codon	18812..18814(+)	19048,18580,19214	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	73.9	10.6	76.5
MGA_1037	LOCUS_10230	sequence23:19079..19276(+)	frameshift,internal_stop_codon	18811..18813(+)	19213,19047	WP_002262843.1	beta-glucoside-specific PTS transporter subunit IIABC	69.2	7.0	62.2
MGA_1079	LOCUS_10640	sequence25:12996..13244(+)	frameshift,internal_stop_codon	13243..13245(+)	13275,12972	WP_011860824.1	MurR/RpiR family transcriptional regulator	91.5	29.3	33.3
MGA_1084	LOCUS_10680	sequence25:14454..14912(+)	frameshift		14897	WP_002382333.1	alpha-glucosidase	98.7	26.9	67.3
MGA_1085	LOCUS_10690	sequence25:14890..15267(+)	frameshift,internal_stop_codon	15265..15267(+)	14897	WP_011860825.1	alpha-glucosidase	95.2	21.5	68.1
MGA_1086	LOCUS_10700	sequence25:15362..15598(+)	internal_stop_codon	15265..15267(+),15596..15598(+)		WP_002382333.1	alpha-glucosidase	56.4	7.9	59.1
MGA_1088	LOCUS_10720	sequence25:15934..16437(+)	frameshift,internal_stop_codon	16435..16437(+)	16479	WP_011860826.1	PTS transporter subunit IIBCA	68.9	18.4	62.6
MGA_1089	LOCUS_10730	sequence25:16566..16862(+)	frameshift,internal_stop_codon	16435..16437(+)	16479	WP_002360285.1	sucrose-specific PTS transporter subunit IIBC	100.0	15.3	66.3
MGA_1173	LOCUS_11520	sequence31:302..886(+)	internal_stop_codon	884..886(+)		WP_002262530.1	enoyl-CoA hydratase	100.0	74.1	63.6
MGA_1174	LOCUS_11530	sequence31:944..1090(+)	internal_stop_codon	884..886(+)		WP_000400069.1	enoyl-CoA hydratase	95.8	17.6	69.6
MGA_1225	LOCUS_12030	sequence34:1591..1944(-)	internal_stop_codon	1954..1956(-)		WP_000214742.1	carbonic anhydrase	98.3	69.7	85.2
MGA_1226	LOCUS_12040	sequence34:1954..2088(-)	internal_stop_codon	1954..1956(-)		WP_000214742.1	carbonic anhydrase	97.7	26.1	90.7
MGA_1236	LOCUS_12140	sequence34:10591..11277(-)	internal_stop_codon	11431..11433(-)		WP_010906389.1	hypothetical protein	97.8	70.7	53.7
MGA_1255	LOCUS_12300	sequence36:3244..3420(+)	internal_stop_codon	3241..3243(+)		WP_002262352.1	PTS system trehalose-specific EIIBC component	94.8	8.4	61.8
MGA_1257	LOCUS_12310	sequence36:4447..5058(+)	partial			WP_000151017.1	alpha,alpha-phosphotrehalase	99.5	37.3	68.3
MGA_1267	LOCUS_12390	sequence37:4848..5036(+)	frameshift		5012	WP_002263594.1	NAD-dependent malic enzyme	88.7	10.2	70.9
MGA_1268	LOCUS_12400	sequence37:5036..6358(+)	frameshift,internal_stop_codon	6357..6359(+)	5006	WP_011836418.1	NAD-dependent malic enzyme	100.0	81.5	78.5
MGA_1286	LOCUS_12570	sequence38:10317..10745(+)	frameshift		10736	WP_000822763.1	replication initiator protein A	79.6	43.6	67.3
MGA_1288	LOCUS_12590	sequence39:1314..2162(-)	frameshift		2118	WP_002262490.1	elongation factor G	94.7	38.5	96.6
MGA_1289	LOCUS_12600	sequence39:2101..3393(-)	frameshift		2118	WP_002905422.1	elongation factor G	99.5	61.8	96.0
MGA_1299	LOCUS_12700	sequence40:1114..1749(+)	partial			WP_000179397.1	site-specific integrase	98.1	57.3	37.2
MGA_1327	LOCUS_12950	sequence43:1437..1700(+)	partial			WP_002261974.1	dTDP-4-dehydrorhamnose reductase	100.0	30.6	92.0
MGA_1338	LOCUS_13050	sequence44:1025..1276(-)	frameshift		1084,1063	WP_002352208.1	2-hydroxyacyl-CoA dehydratase	90.4	5.2	74.7
MGA_1341	LOCUS_13070	sequence44:2349..2948(+)	frameshift		2241	WP_000227144.1	DUF1003 domain-containing protein	90.5	76.2	66.7
MGA_1342	LOCUS_13080	sequence44:3017..3493(+)	frameshift		3409	WP_002985434.1	RNase adapter RapZ	82.9	44.3	84.7
MGA_1343	LOCUS_13090	sequence44:3459..3914(+)	frameshift		3451	WP_002263721.1	RNase adapter RapZ	100.0	51.0	83.4
MGA_1344	LOCUS_13100	sequence44:3911..4078(+)	frameshift		4075	WP_002263722.1	YvcK family protein	89.1	15.1	79.6
MGA_1345	LOCUS_13110	sequence44:4075..4902(+)	frameshift		4075	WP_001231102.1	YvcK family protein	98.2	83.3	83.0
MGA_1347	LOCUS_13130	sequence44:5832..6170(+)	frameshift		6143	WP_010922096.1	C69 family dipeptidase	90.2	21.4	84.2
MGA_1348	LOCUS_13140	sequence44:6130..6483(+)	frameshift		6471,6143	WP_002351154.1	C69 family dipeptidase	88.0	22.2	84.5
MGA_1349	LOCUS_13150	sequence44:6509..7255(+)	frameshift		6474	WP_002351154.1	C69 family dipeptidase	100.0	53.3	76.2
MGA_1360	LOCUS_13250	sequence46:815..1576(+)	frameshift		779	WP_001232459.1	DhaKLM operon coactivator DhaQ	100.0	79.9	64.5
MGA_1366	LOCUS_13310	sequence46:6594..7193(-)	frameshift		7269	WP_012775632.1	FAD-containing oxidoreductase	99.0	45.0	69.0
MGA_1367	LOCUS_13320	sequence46:7234..7911(-)	frameshift		7269	WP_000958961.1	FAD-containing oxidoreductase	94.7	48.6	66.7
MGA_1368	LOCUS_13330	sequence47:1..1614(+)	partial			WP_000768163.1	isoleucine--tRNA ligase	100.0	57.8	84.9
MGA_1372	LOCUS_13370	sequence47:5225..5395(+)	partial			WP_002263568.1	ornithine carbamoyltransferase	85.7	14.7	62.5
MGA_1381	LOCUS_13460	sequence48:4358..5404(+)	partial			WP_011392212.1	PAS domain S-box protein	65.2	27.6	33.5
MGA_1382	LOCUS_13470	sequence48:5580..6455(+)	internal_stop_codon	5475..5477(+)		WP_002918104.1	bifunctional glycosyltransferase family 2/GtrA family protein	98.6	82.2	44.1
MGA_1385	LOCUS_13480	sequence49:306..596(-)	frameshift		616	WP_000567425.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	100.0	37.8	78.1
MGA_1387	LOCUS_13490	sequence49:1440..1949(+)	frameshift		1368	WP_002912008.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	98.8	67.9	76.0
MGA_1388	LOCUS_13500	sequence49:2043..2720(+)	partial			WP_002261916.1	helix-hairpin-helix domain-containing protein	69.8	72.9	57.9
MGA_1389	LOCUS_13510	sequence49:3208..4167(+)	frameshift		4089	WP_011836678.1	DNA internalization-related competence protein ComEC/Rec2	94.0	40.5	51.8
MGA_1390	LOCUS_13520	sequence49:4175..4948(+)	frameshift		4116	WP_002261915.1	DNA internalization-related competence protein ComEC/Rec2	100.0	34.5	70.0
MGA_1393	LOCUS_13550	sequence50:28..1437(-)	partial			WP_002262166.1	transcription antiterminator	95.9	69.1	61.3
MGA_1394	LOCUS_13560	sequence50:1457..2308(-)	frameshift		2381	WP_002262165.1	PTS mannitol transporter subunit IICB	99.3	47.4	57.2
MGA_1395	LOCUS_13570	sequence50:2190..3230(-)	frameshift		2381	WP_000391686.1	PTS mannitol-specific transporter subunit IIBC	82.7	48.6	75.9
MGA_1406	LOCUS_13670	sequence52:349..606(+)	partial			WP_000593347.1	Cof-type HAD-IIB family hydrolase	55.3	17.2	68.1
MGA_1407	LOCUS_13680	sequence52:579..1094(+)	frameshift		543	WP_002262234.1	Cof-type HAD-IIB family hydrolase	98.2	62.2	47.6
MGA_1427	LOCUS_13840	sequence55:3..977(+)	partial			WP_010922784.1	YhgE/Pip domain-containing protein	95.7	41.0	54.2
MGA_1433	LOCUS_13890	sequence55:3663..3818(-)	partial			WP_011837676.1	site-specific integrase	98.0	11.9	72.0
MGA_1447	LOCUS_14020	sequence57:4568..4927(+)	partial			WP_000124839.1	50S ribosomal protein L20	68.9	68.9	96.3
MGA_1456	LOCUS_14080	sequence59:539..2365(-)	frameshift		619	WP_010922655.1	type I restriction endonuclease subunit R	72.2	43.3	66.7
MGA_1469	LOCUS_14170	sequence63:1..528(+)	partial			WP_001247520.1	GBS Bsp-like repeat-containing protein	99.4	20.0	55.2
MGA_1471	LOCUS_14190	sequence63:2179..>2733(-)	partial			WP_002262228.1	L-lactate dehydrogenase	100.0	55.8	84.8