{
    "type": "genome",
    "identifier": "GCA_002310075.1",
    "organism": "Bacteroidales bacterium UBA1204",
    "title": "Bacteroidales bacterium UBA1204",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002310075.1",
        "bioproject": "PRJNA348753",
        "biosample": "SAMN06454747",
        "wgs_master": "DBXU00000000.1",
        "refseq_category": "na",
        "taxid": "1950391",
        "species_taxid": "1950391",
        "organism_name": "Bacteroidales bacterium UBA1204",
        "infraspecific_name": "",
        "isolate": "UBA1204",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/09/18",
        "asm_name": "ASM231007v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/310/075/GCA_002310075.1_ASM231007v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-09-18",
    "dateModified": "2017-09-18",
    "datePublished": "2017-09-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidales bacterium UBA1204"
        ],
        "sample_taxid": [
            "1950391"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "NULL"
        ],
        "sample_host_location_id": [],
        "data_size": "0.658 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 45.37,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2301989",
        "Number of Sequences": "188",
        "Longest Sequences (bp)": "59868",
        "N50 (bp)": "19166",
        "Gap Ratio (%)": "1.165166",
        "GCcontent (%)": "48.8",
        "Number of CDSs": "1920",
        "Average Protein Length": "331.9",
        "Coding Ratio (%)": "83.0",
        "Number of rRNAs": "0",
        "Number of tRNAs": "26",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 45.37,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_002310075.1",
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                "total_fragments": 675,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.19",
                "min_intra_species_ani": "95.43",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.73",
                "num_clustered_genomes": 9,
                "status": "conclusive"
            },
            {
                "accession": "GCA_902786745.1",
                "gtdb_species": "s__Limimorpha sp902786745",
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                "total_fragments": 675,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.85",
                "min_intra_species_ani": "95.75",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017539045.1",
                "gtdb_species": "s__Limimorpha sp017539045",
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                "matched_fragments": 373,
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900318265.1",
                "gtdb_species": "s__Limimorpha sp900318265",
                "ani": 81.6588,
                "matched_fragments": 373,
                "total_fragments": 675,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.16",
                "min_intra_species_ani": "95.28",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_900318085.1",
                "gtdb_species": "s__Limimorpha sp900318085",
                "ani": 81.4863,
                "matched_fragments": 396,
                "total_fragments": 675,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.28",
                "min_intra_species_ani": "96.84",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 12,
                "status": "-"
            },
            {
                "accession": "GCA_017395365.1",
                "gtdb_species": "s__Limimorpha sp017395365",
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                "matched_fragments": 260,
                "total_fragments": 675,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902801625.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902799345.1",
                "gtdb_species": "s__Limimorpha sp902799345",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__F082;g__Limimorpha",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_017632935.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902771635.1",
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                "mean_intra_species_ani": "N/A",
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            {
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_902789915.1",
                "gtdb_species": "s__Limimorpha sp902789915",
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                "mean_intra_species_ani": "95.09",
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            },
            {
                "accession": "GCA_905233685.1",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.217,
        "cell_length": 0.157,
        "doubling_h": 0.206,
        "growth_tmp": 36.585,
        "optimum_tmp": 36.041,
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        "gc_content": 44.947,
        "coding_genes": 3043.648,
        "rRNA16S_genes": 4.032,
        "tRNA_genes": 57.661,
        "gram_stain": 0.014,
        "sporulation": 0.0,
        "motility": 0.04,
        "range_salinity": 0.0,
        "facultative_respiration": 0.006,
        "anaerobic_respiration": 0.958,
        "aerobic_respiration": 0.034,
        "mesophilic_range_tmp": 0.985,
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        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.95,
        "coccus_cell_shape": 0.024,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.024,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__F082",
        "g__Limimorpha",
        "s__Limimorpha sp002310075"
    ],
    "_genome_taxon": [
        "Bacteroidales",
        "bacterium",
        "UBA1204",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__F082",
        "g__Limimorpha",
        "s__Limimorpha sp002310075",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "F082",
        "Limimorpha",
        "Limimorpha",
        "sp002310075"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}