{
    "type": "genome",
    "identifier": "GCA_002320175.1",
    "organism": "Butyricimonas virosa",
    "title": "Butyricimonas virosa",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002320175.1",
        "bioproject": "PRJNA348753",
        "biosample": "SAMN06452869",
        "wgs_master": "DCJY00000000.1",
        "refseq_category": "na",
        "taxid": "544645",
        "species_taxid": "544645",
        "organism_name": "Butyricimonas virosa",
        "infraspecific_name": "",
        "isolate": "UBA1688",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/09/21",
        "asm_name": "ASM232017v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "GCF_002320175.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/320/175/GCA_002320175.1_ASM232017v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-09-21",
    "dateModified": "2017-09-21",
    "datePublished": "2017-09-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Butyricimonas virosa"
        ],
        "sample_taxid": [
            "544645"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Zoo of Hamburg"
        ],
        "sample_host_location_id": [],
        "data_size": "1.232 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4331791",
        "Number of Sequences": "45",
        "Longest Sequences (bp)": "593149",
        "N50 (bp)": "137717",
        "Gap Ratio (%)": "0.012789",
        "GCcontent (%)": "42.3",
        "Number of CDSs": "3429",
        "Average Protein Length": "377.9",
        "Coding Ratio (%)": "89.7",
        "Number of rRNAs": "5",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Butyricimonas virosa",
                "strain": "strain=DSM 23226",
                "accession": "GCA_000519105.1",
                "taxid": 544645,
                "species_taxid": 544645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.2247,
                "matched_fragments": 1232,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Butyricimonas virosa",
                "strain": "strain=DSM 23226",
                "accession": "GCA_025148635.1",
                "taxid": 544645,
                "species_taxid": 544645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 98.2118,
                "matched_fragments": 1243,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Butyricimonas paravirosa",
                "strain": "strain=DSM 105722",
                "accession": "GCA_011927845.1",
                "taxid": 1472417,
                "species_taxid": 1472417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.9625,
                "matched_fragments": 1120,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas paravirosa",
                "strain": "strain=JCM 18677",
                "accession": "GCA_014647355.1",
                "taxid": 1472417,
                "species_taxid": 1472417,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.9551,
                "matched_fragments": 1120,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas faecihominis",
                "strain": "strain=DSM 105721",
                "accession": "GCA_014196975.1",
                "taxid": 1472416,
                "species_taxid": 1472416,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.4215,
                "matched_fragments": 1031,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas faecalis",
                "strain": "strain=H184",
                "accession": "GCA_003991565.1",
                "taxid": 2093856,
                "species_taxid": 2093856,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.9664,
                "matched_fragments": 900,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Butyricimonas faecalis",
                "strain": "strain=vagina",
                "accession": "GCA_900258545.1",
                "taxid": 2093856,
                "species_taxid": 2093856,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.9652,
                "matched_fragments": 882,
                "total_fragments": 1421,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000519105.1",
                "gtdb_species": "s__Butyricimonas virosa",
                "ani": 98.2247,
                "matched_fragments": 1232,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.30",
                "min_intra_species_ani": "95.30",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 18,
                "status": "conclusive"
            },
            {
                "accession": "GCF_011927845.1",
                "gtdb_species": "s__Butyricimonas paravirosa",
                "ani": 91.9782,
                "matched_fragments": 1119,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.86",
                "min_intra_species_ani": "97.78",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_014647335.1",
                "gtdb_species": "s__Butyricimonas faecihominis",
                "ani": 91.5466,
                "matched_fragments": 1022,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.47",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_019117165.1",
                "gtdb_species": "s__Butyricimonas faecavium",
                "ani": 89.2407,
                "matched_fragments": 760,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003991565.1",
                "gtdb_species": "s__Butyricimonas faecalis",
                "ani": 87.9614,
                "matched_fragments": 902,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.78",
                "min_intra_species_ani": "97.96",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_900761485.1",
                "gtdb_species": "s__Butyricimonas sp900761485",
                "ani": 83.4221,
                "matched_fragments": 744,
                "total_fragments": 1421,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Marinifilaceae;g__Butyricimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.0,
        "cell_length": 0.176,
        "doubling_h": null,
        "growth_tmp": 37.0,
        "optimum_tmp": 32.5,
        "optimum_ph": null,
        "genome_size": 4717814.5,
        "gc_content": 42.3,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Marinifilaceae",
        "g__Butyricimonas",
        "s__Butyricimonas virosa"
    ],
    "_genome_taxon": [
        "Butyricimonas",
        "virosa",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Marinifilaceae",
        "g__Butyricimonas",
        "s__Butyricimonas virosa",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Marinifilaceae",
        "Butyricimonas",
        "Butyricimonas",
        "virosa"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}