{ "tc_result": [ { "organism_name": "Pusillimonas maritima", "strain": "strain=17-4A", "accession": "GCA_003576595.1", "taxid": 2026239, "species_taxid": 2026239, "relation_to_type": "type", "validated": true, "ani": 83.7877, "matched_fragments": 772, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas minor", "strain": "strain=YC-7-48", "accession": "GCA_014237865.1", "taxid": 2697024, "species_taxid": 2697024, "relation_to_type": "type", "validated": true, "ani": 77.7529, "matched_fragments": 248, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eoetvoesia caeni", "strain": "strain=DSM 25520", "accession": "GCA_003315175.1", "taxid": 645616, "species_taxid": 645616, "relation_to_type": "type", "validated": true, "ani": 77.7463, "matched_fragments": 181, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eoetvoesia caeni", "strain": "strain=PB3-7B", "accession": "GCA_013416545.1", "taxid": 645616, "species_taxid": 645616, "relation_to_type": "type", "validated": true, "ani": 77.7092, "matched_fragments": 181, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Eoetvoesia caeni", "strain": "strain=PB3-7B", "accession": "GCA_022688825.1", "taxid": 645616, "species_taxid": 645616, "relation_to_type": "type", "validated": true, "ani": 77.6965, "matched_fragments": 182, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracandidimonas soli", "strain": "strain=DSM 100048", "accession": "GCA_004342005.1", "taxid": 1917182, "species_taxid": 1917182, "relation_to_type": "type", "validated": true, "ani": 77.1647, "matched_fragments": 104, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paralcaligenes ureilyticus", "strain": "strain=DSM 24591", "accession": "GCA_004346225.1", "taxid": 627131, "species_taxid": 627131, "relation_to_type": "type", "validated": true, "ani": 77.0705, "matched_fragments": 118, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas harenae", "strain": "strain=DSM 25667", "accession": "GCA_013416515.1", "taxid": 657015, "species_taxid": 657015, "relation_to_type": "type", "validated": true, "ani": 76.9598, "matched_fragments": 131, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=CCUG 39790", "accession": "GCA_008801975.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.9365, "matched_fragments": 89, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pusillimonas harenae", "strain": "strain=JCM 16917", "accession": "GCA_004153685.1", "taxid": 657015, "species_taxid": 657015, "relation_to_type": "type", "validated": true, "ani": 76.8761, "matched_fragments": 128, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Castellaniella defragrans", "strain": "strain=DSM 12141", "accession": "GCA_014203015.1", "taxid": 75697, "species_taxid": 75697, "relation_to_type": "type", "validated": true, "ani": 76.8028, "matched_fragments": 90, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Advenella alkanexedens", "strain": "strain=LAM0050", "accession": "GCA_019132845.1", "taxid": 1481665, "species_taxid": 1481665, "relation_to_type": "type", "validated": true, "ani": 76.712, "matched_fragments": 67, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bordetella bronchiseptica", "strain": "strain=CCUG 219", "accession": "GCA_021391275.1", "taxid": 518, "species_taxid": 518, "relation_to_type": "suspected-type", "validated": true, "ani": 76.6804, "matched_fragments": 95, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter spanius", "strain": "strain=LMG 5911", "accession": "GCA_902859605.1", "taxid": 217203, "species_taxid": 217203, "relation_to_type": "suspected-type", "validated": true, "ani": 76.5978, "matched_fragments": 109, "total_fragments": 1094, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 83.33, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002384935.1", "gtdb_species": "s__Pusillimonas_A sp002384935", "ani": 99.9941, "matched_fragments": 1072, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.90", "min_intra_species_ani": "98.23", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.79", "num_clustered_genomes": 9, "status": "conclusive" }, { "accession": "GCF_003576595.1", "gtdb_species": "s__Pusillimonas_A maritima", "ani": 83.7787, "matched_fragments": 773, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.55", "min_intra_species_ani": "95.88", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.85", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_011388195.1", "gtdb_species": "s__Pusillimonas_A sp011388195", "ani": 83.2527, "matched_fragments": 765, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002694155.1", "gtdb_species": "s__Pusillimonas_A sp002694155", "ani": 81.6797, "matched_fragments": 293, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000209655.1", "gtdb_species": "s__Pusillimonas_C sp000209655", "ani": 79.2551, "matched_fragments": 144, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014237865.1", "gtdb_species": "s__Pusillimonas_A sp014237865", "ani": 77.7657, "matched_fragments": 247, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002236805.1", "gtdb_species": "s__Pusillimonas_A sp002236805", "ani": 77.7339, "matched_fragments": 227, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.07", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", 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"num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004346225.1", "gtdb_species": "s__Paralcaligenes ureilyticus", "ani": 77.0729, "matched_fragments": 118, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paralcaligenes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012727555.1", "gtdb_species": "s__JAAYGT01 sp012727555", "ani": 76.9626, "matched_fragments": 117, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__JAAYGT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004153685.1", "gtdb_species": "s__Pusillimonas_C harenae", "ani": 76.8761, "matched_fragments": 128, "total_fragments": 1094, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" } ] }