{ "type": "genome", "identifier": "GCA_002410355.1", "organism": "Enterobacter cloacae", "title": "Enterobacter cloacae", "description": "unverified source organism; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Queensland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_002410355.1", "bioproject": "PRJNA348753", "biosample": "SAMN06453850", "wgs_master": "DHRU00000000.1", "refseq_category": "na", "taxid": "550", "species_taxid": "550", "organism_name": "Enterobacter cloacae", "infraspecific_name": "", "isolate": "UBA5304", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/10/03", "asm_name": "ASM241035v1", "submitter": "University of Queensland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/410/355/GCA_002410355.1_ASM241035v1", "excluded_from_refseq": "unverified source organism; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-10-03", "dateModified": "2017-10-03", "datePublished": "2017-10-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterobacter cloacae" ], "sample_taxid": [ "550" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA:New York City" ], "sample_host_location_id": [], "data_size": "1.283 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 66.67, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4517264", "Number of Sequences": "44", "Longest Sequences (bp)": "305081", "N50 (bp)": "138357", "Gap Ratio (%)": "0.085494", "GCcontent (%)": "56.0", "Number of CDSs": "4245", "Average Protein Length": "316.2", "Coding Ratio (%)": "89.1", "Number of rRNAs": "0", "Number of tRNAs": "57", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Enterobacter asburiae", "strain": "strain=ATCC 35953", "accession": "GCA_001521715.1", "taxid": 61645, "species_taxid": 61645, "relation_to_type": "type", "validated": true, "ani": 96.703, "matched_fragments": 1308, "total_fragments": 1488, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterobacter asburiae", "strain": "strain=FDAARGOS_892", "accession": "GCA_016027695.1", "taxid": 61645, "species_taxid": 61645, "relation_to_type": "type", "validated": true, "ani": 96.6852, "matched_fragments": 1312, "total_fragments": 1488, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterobacter vonholyi", "strain": "strain=E13", "accession": "GCA_008364555.1", "taxid": 2797505, "species_taxid": 2797505, "relation_to_type": "type", "validated": true, "ani": 94.3834, "matched_fragments": 1321, "total_fragments": 1488, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter roggenkampii", "strain": "strain=DSM 16690", "accession": "GCA_024390995.1", "taxid": 1812935, "species_taxid": 1812935, "relation_to_type": "type", "validated": true, "ani": 93.4346, "matched_fragments": 1249, "total_fragments": 1488, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter roggenkampii", "strain": "strain=FDAARGOS 1430", "accession": "GCA_019047025.1", "taxid": 1812935, "species_taxid": 1812935, "relation_to_type": "type", "validated": true, "ani": 93.3335, "matched_fragments": 1316, "total_fragments": 1488, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterobacter roggenkampii", "strain": "strain=DSM 16690", "accession": "GCA_001729805.1", "taxid": 1812935, 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