{
    "type": "genome",
    "identifier": "GCA_002480705.1",
    "organism": "Bdellovibrionaceae bacterium UBA7794",
    "title": "Bdellovibrionaceae bacterium UBA7794",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002480705.1",
        "bioproject": "PRJNA348753",
        "biosample": "SAMN06455190",
        "wgs_master": "DLCQ00000000.1",
        "refseq_category": "na",
        "taxid": "1961521",
        "species_taxid": "1961521",
        "organism_name": "Bdellovibrionaceae bacterium UBA7794",
        "infraspecific_name": "",
        "isolate": "UBA7794",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/10/06",
        "asm_name": "ASM248070v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/480/705/GCA_002480705.1_ASM248070v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-10-06",
    "dateModified": "2017-10-06",
    "datePublished": "2017-10-06",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bdellovibrionaceae bacterium UBA7794"
        ],
        "sample_taxid": [
            "1961521"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.024 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 97.22,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3604513",
        "Number of Sequences": "126",
        "Longest Sequences (bp)": "149212",
        "N50 (bp)": "47834",
        "Gap Ratio (%)": "0.458620",
        "GCcontent (%)": "37.8",
        "Number of CDSs": "3158",
        "Average Protein Length": "321.3",
        "Coding Ratio (%)": "84.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 97.22,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002436415.1",
                "gtdb_species": "s__UBA6502 sp002436415",
                "ani": 99.9859,
                "matched_fragments": 1114,
                "total_fragments": 1137,
                "gtdb_taxonomy": "d__Bacteria;p__Bdellovibrionota;c__Bdellovibrionia;o__Bdellovibrionales;f__UBA840;g__UBA6502",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 10,
                "status": "conclusive"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": -0.023,
        "doubling_h": 0.146,
        "growth_tmp": 29.0,
        "optimum_tmp": 29.0,
        "optimum_ph": null,
        "genome_size": 3168292.034,
        "gc_content": 45.625,
        "coding_genes": 2993.954,
        "rRNA16S_genes": 1.416,
        "tRNA_genes": 33.928,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.5,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.5,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bdellovibrionota",
        "c__Bdellovibrionia",
        "o__Bdellovibrionales",
        "f__UBA840",
        "g__UBA6502",
        "s__UBA6502 sp002436415"
    ],
    "_genome_taxon": [
        "Bdellovibrionaceae",
        "bacterium",
        "UBA7794",
        "d__Bacteria",
        "p__Bdellovibrionota",
        "c__Bdellovibrionia",
        "o__Bdellovibrionales",
        "f__UBA840",
        "g__UBA6502",
        "s__UBA6502 sp002436415",
        "Bacteria",
        "Bdellovibrionota",
        "Bdellovibrionia",
        "Bdellovibrionales",
        "UBA840",
        "UBA6502",
        "UBA6502",
        "sp002436415"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}