{ "type": "genome", "identifier": "GCA_002708585.1", "organism": "Hyphomonadaceae bacterium", "title": "Hyphomonadaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Tara Oceans Consortium", "publication": [ {} ], "properties": { "assembly_accession": "GCA_002708585.1", "bioproject": "PRJNA391943", "biosample": "SAMN07619239", "wgs_master": "PAOS00000000.1", "refseq_category": "na", "taxid": "2026748", "species_taxid": "2026748", "organism_name": "Hyphomonadaceae bacterium", "infraspecific_name": "", "isolate": "SAT21", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/10/25", "asm_name": "ASM270858v1", "submitter": "Tara Oceans Consortium", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/708/585/GCA_002708585.1_ASM270858v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-10-25", "dateModified": "2017-10-25", "datePublished": "2017-10-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Hyphomonadaceae bacterium" ], "sample_taxid": [ "2026748" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Atlantic Ocean" ], "sample_host_location_id": [], "data_size": "0.953 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 50.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3279859", "Number of Sequences": "97", "Longest Sequences (bp)": "149395", 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95, "status": "below_threshold" }, { "organism_name": "Jiella sonneratiae", "strain": "strain=MQZ13P-4", "accession": "GCA_017353515.1", "taxid": 2816856, "species_taxid": 2816856, "relation_to_type": "type", "validated": true, "ani": 75.6625, "matched_fragments": 55, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium viridifuturi", "strain": "strain=SEMIA 690", "accession": "GCA_001238275.1", "taxid": 1654716, "species_taxid": 1654716, "relation_to_type": "type", "validated": true, "ani": 75.2341, "matched_fragments": 56, "total_fragments": 1046, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 50.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_002414505.1", "gtdb_species": "s__Hyphomonas sp002414505", "ani": 98.8198, "matched_fragments": 849, "total_fragments": 1046, "gtdb_taxonomy": 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