{
    "type": "genome",
    "identifier": "GCA_002720175.1",
    "organism": "Rickettsiales bacterium",
    "title": "Rickettsiales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Tara Oceans Consortium",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002720175.1",
        "bioproject": "PRJNA391943",
        "biosample": "SAMN07620267",
        "wgs_master": "PBHG00000000.1",
        "refseq_category": "na",
        "taxid": "2026788",
        "species_taxid": "2026788",
        "organism_name": "Rickettsiales bacterium",
        "infraspecific_name": "",
        "isolate": "SP3037",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/10/25",
        "asm_name": "ASM272017v1",
        "submitter": "Tara Oceans Consortium",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/720/175/GCA_002720175.1_ASM272017v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-10-25",
    "dateModified": "2017-10-25",
    "datePublished": "2017-10-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rickettsiales bacterium"
        ],
        "sample_taxid": [
            "2026788"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "1.265 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.71,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4470947",
        "Number of Sequences": "61",
        "Longest Sequences (bp)": "428177",
        "N50 (bp)": "106470",
        "Gap Ratio (%)": "0.005994",
        "GCcontent (%)": "60.6",
        "Number of CDSs": "3488",
        "Average Protein Length": "390.3",
        "Coding Ratio (%)": "91.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 58.71,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002433485.1",
                "gtdb_species": "s__UBA6601 sp002433485",
                "ani": 99.865,
                "matched_fragments": 1359,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA796;o__UBA9615;f__UBA9615;g__UBA6601",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.91",
                "min_intra_species_ani": "99.91",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002724675.1",
                "gtdb_species": "s__GCA-2724675 sp002724675",
                "ani": 76.2162,
                "matched_fragments": 128,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA796;o__UBA9615;f__UBA9615;g__GCA-2724675",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018401435.1",
                "gtdb_species": "s__M30B51 sp018401435",
                "ani": 75.3136,
                "matched_fragments": 62,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA796;o__UBA796;f__UBA2385;g__M30B51",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016792625.1",
                "gtdb_species": "s__JAEUKK01 sp016792625",
                "ani": 75.3113,
                "matched_fragments": 52,
                "total_fragments": 1460,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA796;o__UBA796;f__UBA2385;g__JAEUKK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.42,
        "cell_length": -0.048,
        "doubling_h": 1.099,
        "growth_tmp": 34.8,
        "optimum_tmp": 35.2,
        "optimum_ph": 7.283,
        "genome_size": 1329876.456,
        "gc_content": 33.926,
        "coding_genes": 1120.069,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 34.221,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.041,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.782,
        "coccus_cell_shape": 0.173,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.043,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Myxococcota",
        "c__UBA796",
        "o__UBA9615",
        "f__UBA9615",
        "g__UBA6601",
        "s__UBA6601 sp002433485"
    ],
    "_genome_taxon": [
        "Rickettsiales",
        "bacterium",
        "d__Bacteria",
        "p__Myxococcota",
        "c__UBA796",
        "o__UBA9615",
        "f__UBA9615",
        "g__UBA6601",
        "s__UBA6601 sp002433485",
        "Bacteria",
        "Myxococcota",
        "UBA796",
        "UBA9615",
        "UBA9615",
        "UBA6601",
        "UBA6601",
        "sp002433485"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}