{
    "type": "genome",
    "identifier": "GCA_002721155.1",
    "organism": "Actinomycetota bacterium",
    "title": "Actinomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Tara Oceans Consortium",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002721155.1",
        "bioproject": "PRJNA391943",
        "biosample": "SAMN07618263",
        "wgs_master": "PBJQ00000000.1",
        "refseq_category": "na",
        "taxid": "2900548",
        "species_taxid": "2900548",
        "organism_name": "Actinomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "SP290",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/10/25",
        "asm_name": "ASM272115v1",
        "submitter": "Tara Oceans Consortium",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/721/155/GCA_002721155.1_ASM272115v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-10-25",
    "dateModified": "2017-10-25",
    "datePublished": "2017-10-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: South Pacific Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "0.147 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 41.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "516008",
        "Number of Sequences": "18",
        "Longest Sequences (bp)": "50961",
        "N50 (bp)": "32468",
        "Gap Ratio (%)": "0.333522",
        "GCcontent (%)": "32.2",
        "Number of CDSs": "552",
        "Average Protein Length": "290.5",
        "Coding Ratio (%)": "93.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "15",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 41.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_902626065.1",
                "gtdb_species": "s__Actinomarina sp902626065",
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                "matched_fragments": 113,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.15",
                "min_intra_species_ani": "96.15",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_902627635.1",
                "gtdb_species": "s__Actinomarina sp902627635",
                "ani": 82.2568,
                "matched_fragments": 66,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902526825.1",
                "gtdb_species": "s__Actinomarina sp902526825",
                "ani": 81.9255,
                "matched_fragments": 71,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000384495.1",
                "gtdb_species": "s__Actinomarina sp000384495",
                "ani": 81.5697,
                "matched_fragments": 58,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.56",
                "min_intra_species_ani": "95.50",
                "mean_intra_species_af": "0.68",
                "min_intra_species_af": "0.67",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_902587025.1",
                "gtdb_species": "s__Actinomarina sp902587025",
                "ani": 81.4791,
                "matched_fragments": 54,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.69",
                "min_intra_species_ani": "95.12",
                "mean_intra_species_af": "0.65",
                "min_intra_species_af": "0.61",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_003213625.1",
                "gtdb_species": "s__Actinomarina sp003213625",
                "ani": 81.3694,
                "matched_fragments": 88,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.18",
                "min_intra_species_ani": "95.09",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 29,
                "status": "-"
            },
            {
                "accession": "GCA_902519845.1",
                "gtdb_species": "s__Actinomarina sp902519845",
                "ani": 78.9318,
                "matched_fragments": 76,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.50",
                "min_intra_species_ani": "95.50",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902533795.1",
                "gtdb_species": "s__Actinomarina sp902533795",
                "ani": 78.858,
                "matched_fragments": 76,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.75",
                "min_intra_species_ani": "95.75",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902571385.1",
                "gtdb_species": "s__Actinomarina sp902571385",
                "ani": 78.3602,
                "matched_fragments": 86,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.95",
                "min_intra_species_ani": "95.63",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.83",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_902604835.1",
                "gtdb_species": "s__Actinomarina sp902604835",
                "ani": 78.2332,
                "matched_fragments": 73,
                "total_fragments": 163,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Actinomarinales;f__Actinomarinaceae;g__Actinomarina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.34",
                "min_intra_species_ani": "95.34",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Actinomarinales",
        "f__Actinomarinaceae",
        "g__Actinomarina",
        "s__Actinomarina sp902626065"
    ],
    "_genome_taxon": [
        "Actinomycetota",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Actinomarinales",
        "f__Actinomarinaceae",
        "g__Actinomarina",
        "s__Actinomarina sp902626065",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Actinomarinales",
        "Actinomarinaceae",
        "Actinomarina",
        "Actinomarina",
        "sp902626065"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}