{ "tc_result": [ { "organism_name": "Arcobacter aquimarinus", "strain": "strain=W63", "accession": "GCA_013177635.1", "taxid": 1315211, "species_taxid": 1315211, "relation_to_type": "type", "validated": true, "ani": 76.9157, "matched_fragments": 90, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter aquimarinus", "strain": "strain=CECT 8442", "accession": "GCA_004115795.1", "taxid": 1315211, "species_taxid": 1315211, "relation_to_type": "type", "validated": true, "ani": 76.91, "matched_fragments": 86, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter thereius", "strain": "strain=LMG 24486", "accession": "GCA_001695395.1", "taxid": 544718, "species_taxid": 544718, "relation_to_type": "type", "validated": true, "ani": 76.8427, "matched_fragments": 71, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter thereius", "strain": "strain=LMG 24486", "accession": "GCA_024584025.1", "taxid": 544718, "species_taxid": 544718, "relation_to_type": "type", "validated": true, "ani": 76.8398, "matched_fragments": 72, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=CECT 7835", "accession": "GCA_004116675.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 76.7994, "matched_fragments": 97, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter pacificus", "strain": "strain=CGMCC 1.11011", "accession": "GCA_014636355.1", "taxid": 1080223, "species_taxid": 1080223, "relation_to_type": "type", "validated": true, "ani": 76.7956, "matched_fragments": 73, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter pacificus", "strain": "strain=LMG 26638", "accession": "GCA_004214795.1", "taxid": 1080223, "species_taxid": 1080223, "relation_to_type": "type", "validated": true, "ani": 76.7943, "matched_fragments": 75, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=LMG 26154", "accession": "GCA_003346815.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 76.7911, "matched_fragments": 101, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter thereius", "strain": "strain=LMG 24486", "accession": "GCA_004214815.1", "taxid": 544718, "species_taxid": 544718, "relation_to_type": "type", "validated": true, "ani": 76.7678, "matched_fragments": 73, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=LMG 26156", "accession": "GCA_013201665.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 76.6988, "matched_fragments": 94, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter acticola", "strain": "strain=KCTC 52212", "accession": "GCA_013177675.1", "taxid": 1849015, "species_taxid": 1849015, "relation_to_type": "type", "validated": true, "ani": 76.6355, "matched_fragments": 87, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter caeni", "strain": "strain=RW17-10", "accession": "GCA_003063245.1", "taxid": 1912877, "species_taxid": 1912877, "relation_to_type": "type", "validated": true, "ani": 76.6267, "matched_fragments": 86, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=CECT7836", "accession": "GCA_004023405.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 76.5966, "matched_fragments": 93, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter vitoriensis", "strain": "strain=LMG 30050", "accession": "GCA_024583985.1", "taxid": 2011099, "species_taxid": 2011099, "relation_to_type": "type", "validated": true, "ani": 76.4866, "matched_fragments": 87, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "[Arcobacter] porcinus", "strain": "strain=CCUG 56899", "accession": "GCA_004299785.2", "taxid": 1935204, "species_taxid": 1935204, "relation_to_type": "type", "validated": true, "ani": 76.4718, "matched_fragments": 81, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter vitoriensis", "strain": "strain=CECT 9230", "accession": "GCA_003316695.1", "taxid": 2011099, "species_taxid": 2011099, "relation_to_type": "type", "validated": true, "ani": 76.4657, "matched_fragments": 88, "total_fragments": 329, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 70.45, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_018662405.1", "gtdb_species": "s__JADHTT01 sp018662405", "ani": 77.9311, "matched_fragments": 65, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__JADHTT01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.77", "min_intra_species_ani": "99.69", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 13, "status": "-" }, { "accession": "GCA_015663165.1", "gtdb_species": "s__CAIJNA01 sp015663165", "ani": 77.6421, "matched_fragments": 85, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__CAIJNA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.59", "min_intra_species_ani": "99.59", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001956695.1", "gtdb_species": "s__Poseidonibacter parvus", "ani": 77.4529, "matched_fragments": 101, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Poseidonibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "98.33", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003667345.1", "gtdb_species": "s__Poseidonibacter antarcticus", "ani": 77.3785, "matched_fragments": 83, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Poseidonibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002869565.1", "gtdb_species": "s__Halarcobacter sp002869565", "ani": 77.2881, "matched_fragments": 84, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Halarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018861145.1", "gtdb_species": "s__Poseidonibacter lekithochrous_A", "ani": 77.1138, "matched_fragments": 97, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Poseidonibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017995775.1", "gtdb_species": "s__Aliarcobacter sp017995775", "ani": 76.9283, "matched_fragments": 81, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.13", "min_intra_species_ani": "99.13", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.84", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013177635.1", "gtdb_species": "s__Aliarcobacter aquimarinus", "ani": 76.9157, "matched_fragments": 90, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003252105.1", "gtdb_species": "s__Halarcobacter sp003252105", "ani": 76.8415, "matched_fragments": 92, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Halarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004214815.1", "gtdb_species": "s__Aliarcobacter thereius", "ani": 76.8005, "matched_fragments": 72, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.14", "min_intra_species_ani": "98.62", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.89", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_004214795.1", "gtdb_species": "s__Aliarcobacter pacificus", "ani": 76.7908, "matched_fragments": 75, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_013201665.1", "gtdb_species": "s__Aliarcobacter venerupis", "ani": 76.7504, "matched_fragments": 93, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_004116495.1", "gtdb_species": "s__Malaciobacter sp004116495", "ani": 76.7333, "matched_fragments": 91, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Malaciobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004116625.1", "gtdb_species": "s__Halarcobacter mediterraneus", "ani": 76.7316, "matched_fragments": 96, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Halarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014352935.1", "gtdb_species": "s__Aliarcobacter cryaerophilus_A", "ani": 76.6729, "matched_fragments": 83, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "96.41", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.82", "num_clustered_genomes": 23, "status": "-" }, { "accession": "GCA_018399655.1", "gtdb_species": "s__CAIJNA01 sp018399655", "ani": 76.6323, "matched_fragments": 61, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__CAIJNA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013177675.1", "gtdb_species": "s__Aliarcobacter acticola", "ani": 76.6114, "matched_fragments": 88, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__Aliarcobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016744485.1", "gtdb_species": "s__BB30 sp016744485", "ani": 76.2503, "matched_fragments": 63, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__BB30", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.52", "min_intra_species_ani": "99.52", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.89", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_013215945.1", "gtdb_species": "s__NORP36 sp004566295", "ani": 76.1458, "matched_fragments": 69, "total_fragments": 329, "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Arcobacteraceae;g__NORP36", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.94", "min_intra_species_ani": "99.94", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" } ] }