{
    "type": "genome",
    "identifier": "GCA_002862425.1",
    "organism": "Pseudomonadota bacterium",
    "title": "Pseudomonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Max planck institute for marine microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_002862425.1",
        "bioproject": "PRJNA421797",
        "biosample": "SAMN08158043",
        "wgs_master": "PKDB00000000.1",
        "refseq_category": "na",
        "taxid": "1977087",
        "species_taxid": "1977087",
        "organism_name": "Pseudomonadota bacterium",
        "infraspecific_name": "",
        "isolate": "Gammapro8",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/01/04",
        "asm_name": "ASM286242v1",
        "submitter": "Max planck institute for marine microbiology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/002/862/425/GCA_002862425.1_ASM286242v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-01-04",
    "dateModified": "2018-01-04",
    "datePublished": "2018-01-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudomonadota bacterium"
        ],
        "sample_taxid": [
            "1977087"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Atlantic Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "1.060 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 66.15,
        "contamination": 2.08,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3745564",
        "Number of Sequences": "281",
        "Longest Sequences (bp)": "91158",
        "N50 (bp)": "20882",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.7",
        "Number of CDSs": "3314",
        "Average Protein Length": "313.4",
        "Coding Ratio (%)": "83.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "52",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Halopseudomonas aestusnigri",
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                "relation_to_type": "type",
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            },
            {
                "organism_name": "Halopseudomonas aestusnigri",
                "strain": "strain=CECT 8317",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Halopseudomonas oceani",
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                "ani_threshold": 95,
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            },
            {
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                "organism_name": "Halopseudomonas pachastrellae",
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                "species_taxid": 254161,
                "relation_to_type": "type",
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                "status": "below_threshold"
            },
            {
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                "accession": "GCA_001989375.1",
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                "species_taxid": 254161,
                "relation_to_type": "type",
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                "ani": 84.1516,
                "matched_fragments": 750,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas songnenensis",
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                "accession": "GCA_024448495.1",
                "taxid": 1176259,
                "species_taxid": 1176259,
                "relation_to_type": "type",
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                "ani": 78.4569,
                "matched_fragments": 274,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas songnenensis",
                "strain": "strain=NEAU-ST5-5",
                "accession": "GCA_003696315.1",
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                "species_taxid": 1176259,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 278,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stutzerimonas degradans",
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                "accession": "GCA_002891015.1",
                "taxid": 2968968,
                "species_taxid": 2968968,
                "relation_to_type": "type",
                "validated": true,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Stutzerimonas degradans",
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                "relation_to_type": "suspected-type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Stutzerimonas degradans",
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                "accession": "GCA_024448505.1",
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                "relation_to_type": "type",
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                "ani": 78.0705,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
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                "accession": "GCF_002197985.1",
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                "mean_intra_species_ani": "97.11",
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            },
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                "mean_intra_species_ani": "N/A",
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            },
            {
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            },
            {
                "accession": "GCF_900105655.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Pseudomonadaceae",
        "g__Halopseudomonas",
        "s__Halopseudomonas aestusnigri"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Pseudomonadaceae",
        "g__Halopseudomonas",
        "s__Halopseudomonas aestusnigri",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Pseudomonadaceae",
        "Halopseudomonas",
        "Halopseudomonas",
        "aestusnigri"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}