{ "tc_result": [ { "organism_name": "Rhodobium orientis", "strain": "strain=DSM 11290", "accession": "GCA_003258835.1", "taxid": 34017, "species_taxid": 34017, "relation_to_type": "type", "validated": true, "ani": 76.9064, "matched_fragments": 206, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tepidicaulis marinus", "strain": "strain=MA2", "accession": "GCA_000739695.1", "taxid": 1333998, "species_taxid": 1333998, "relation_to_type": "type", "validated": true, "ani": 76.84, "matched_fragments": 122, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tepidamorphus gemmatus", "strain": "strain=DSM 19345", "accession": "GCA_004346195.1", "taxid": 747076, "species_taxid": 747076, "relation_to_type": "type", "validated": true, "ani": 76.7119, "matched_fragments": 134, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bauldia litoralis", "strain": 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"total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methyloceanibacter stevinii", "strain": "strain=R-67176", "accession": "GCA_001723355.1", "taxid": 1774970, "species_taxid": 1774970, "relation_to_type": "type", "validated": true, "ani": 76.3325, "matched_fragments": 79, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Camelimonas fluminis", "strain": "strain=KCTC 42282", "accession": "GCA_014656355.1", "taxid": 1576911, "species_taxid": 1576911, "relation_to_type": "type", "validated": true, "ani": 76.2887, "matched_fragments": 106, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bosea vaviloviae", "strain": "strain=Vaf18", "accession": "GCA_001741865.1", "taxid": 1526658, "species_taxid": 1526658, "relation_to_type": "type", "validated": true, "ani": 76.2452, "matched_fragments": 155, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanicella actignis", "strain": "strain=DSM 22673", "accession": "GCA_008124525.1", "taxid": 1189325, "species_taxid": 1189325, "relation_to_type": "type", "validated": true, "ani": 76.2236, "matched_fragments": 135, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oricola indica", "strain": "strain=JL-62", "accession": "GCA_019966595.1", "taxid": 2872591, "species_taxid": 2872591, "relation_to_type": "type", "validated": true, "ani": 76.1489, "matched_fragments": 104, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella pollutisoli", "strain": "strain=KCTC 52677", "accession": "GCA_024609765.1", "taxid": 2250594, "species_taxid": 2250594, "relation_to_type": "type", "validated": true, "ani": 76.1331, "matched_fragments": 128, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Blastochloris viridis", "strain": "strain=ATCC 19567", "accession": "GCA_001402875.1", "taxid": 1079, "species_taxid": 1079, "relation_to_type": "type", "validated": true, "ani": 76.1248, "matched_fragments": 140, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelatococcus asaccharovorans", "strain": "strain=DSM 6462", "accession": "GCA_018398275.1", "taxid": 28210, "species_taxid": 28210, "relation_to_type": "type", "validated": true, "ani": 76.0867, "matched_fragments": 113, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chelatococcus asaccharovorans", "strain": "strain=DSM 6462", "accession": "GCA_003201475.1", "taxid": 28210, "species_taxid": 28210, "relation_to_type": "type", "validated": true, "ani": 76.0866, "matched_fragments": 113, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azorhizobium caulinodans", "strain": "strain=ORS 571", "accession": "GCA_000010525.1", "taxid": 7, "species_taxid": 7, "relation_to_type": "type", "validated": true, "ani": 76.0646, "matched_fragments": 123, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodopseudomonas pentothenatexigens", "strain": "strain=JA575", "accession": "GCA_003385925.1", "taxid": 999699, "species_taxid": 999699, "relation_to_type": "type", "validated": true, "ani": 76.0519, "matched_fragments": 139, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodopseudomonas pentothenatexigens", "strain": "strain=JA575", "accession": "GCA_900218015.1", "taxid": 999699, "species_taxid": 999699, "relation_to_type": "type", "validated": true, "ani": 76.0519, "matched_fragments": 139, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neomegalonema perideroedes", "strain": "strain=DSM 15528", "accession": "GCA_000374145.1", "taxid": 217219, "species_taxid": 217219, "relation_to_type": "type", "validated": true, "ani": 76.047, "matched_fragments": 76, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella kummerowiae", "strain": "strain=CCBAU 25048", "accession": "GCA_009827055.1", "taxid": 417745, "species_taxid": 417745, "relation_to_type": "type", "validated": true, "ani": 75.9597, "matched_fragments": 96, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium terrae", "strain": "strain=17Sr1-28", "accession": "GCA_003173755.1", "taxid": 2202827, "species_taxid": 2202827, "relation_to_type": "type", "validated": true, "ani": 75.8531, "matched_fragments": 135, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Celeribacter neptunius", "strain": "strain=DSM 26471", "accession": "GCA_900113955.1", "taxid": 588602, "species_taxid": 588602, "relation_to_type": "type", "validated": true, "ani": 75.8137, "matched_fragments": 75, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseococcus pinisoli", "strain": "strain=XZZS9", "accession": "GCA_018413645.1", "taxid": 2835040, "species_taxid": 2835040, "relation_to_type": "type", "validated": true, "ani": 75.8121, "matched_fragments": 74, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovastum atsumiense", "strain": "strain=G2-11", "accession": "GCA_937425535.1", "taxid": 504468, "species_taxid": 504468, "relation_to_type": "type", "validated": true, "ani": 75.8054, "matched_fragments": 146, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovarius lipocyclicus", "strain": "strain=CCUG 44693", "accession": "GCA_009900765.1", "taxid": 268410, "species_taxid": 268410, "relation_to_type": "type", "validated": true, "ani": 75.7581, "matched_fragments": 108, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shinella yambaruensis", "strain": "strain=DSM 18801", "accession": "GCA_022899355.1", "taxid": 415996, "species_taxid": 415996, "relation_to_type": "type", "validated": true, "ani": 75.7519, "matched_fragments": 143, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cohaesibacter intestini", "strain": "strain=YE-B6", "accession": "GCA_003324485.1", "taxid": 2211145, "species_taxid": 2211145, "relation_to_type": "type", "validated": true, "ani": 75.6325, "matched_fragments": 76, "total_fragments": 955, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.46, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_002869085.1", "gtdb_species": "s__BM303 sp002869085", "ani": 100.0, "matched_fragments": 940, "total_fragments": 955, "gtdb_taxonomy": 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"d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Beijerinckiaceae;g__Methylobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.78", "min_intra_species_ani": "98.73", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000374145.1", "gtdb_species": "s__Neomegalonema perideroedes", "ani": 76.0264, "matched_fragments": 77, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Neomegalonema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017309185.1", "gtdb_species": "s__Roseibium aggregatum_B", "ani": 75.9146, "matched_fragments": 107, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Stappiaceae;g__Roseibium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002383105.1", "gtdb_species": "s__Methyloceanibacter sp002383105", "ani": 75.9036, "matched_fragments": 77, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Methyloligellaceae;g__Methyloceanibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.16", "min_intra_species_ani": "99.02", "mean_intra_species_af": "0.80", "min_intra_species_af": "0.75", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCA_007131685.1", "gtdb_species": "s__Rhodobaculum sp007131685", "ani": 75.6934, "matched_fragments": 66, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Rhodobaculum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.44", "min_intra_species_ani": "99.41", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_003258405.1", "gtdb_species": "s__Amaricoccus sp003258405", "ani": 75.6358, "matched_fragments": 89, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Amaricoccus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003324485.1", "gtdb_species": "s__Cohaesibacter intestini", "ani": 75.6325, "matched_fragments": 76, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Cohaesibacteraceae;g__Cohaesibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.38", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903930095.1", "gtdb_species": "s__Aestuariivirga sp903930095", "ani": 75.5235, "matched_fragments": 76, "total_fragments": 955, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhizobiales;f__Aestuariivirgaceae;g__Aestuariivirga", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }