{ "type": "genome", "identifier": "GCA_003167455.1", "organism": "Candidatus Eremiobacteraeota bacterium", "title": "Candidatus Eremiobacteraeota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Australian Centre for Ecogenomics, The University of Queensland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_003167455.1", "bioproject": "PRJNA386568", "biosample": "SAMN08178908", "wgs_master": "PMTD00000000.1", "refseq_category": "na", "taxid": "2052317", "species_taxid": "2052317", "organism_name": "Candidatus Eremiobacteraeota bacterium", "infraspecific_name": "", "isolate": "palsa_1481", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/05/25", "asm_name": "20110700_P2D", "submitter": "Australian Centre for Ecogenomics, The University of Queensland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/167/455/GCA_003167455.1_20110700_P2D", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-05-25", "dateModified": "2018-05-25", "datePublished": "2018-05-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Eremiobacteraeota bacterium" ], "sample_taxid": [ "2052317" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden: Stordalen Mire" ], "sample_host_location_id": [], "data_size": "0.721 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 93.92, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2586096", "Number of Sequences": "238", "Longest Sequences (bp)": "52591", "N50 (bp)": "14752", "Gap Ratio (%)": "0.056301", "GCcontent (%)": "64.3", "Number of CDSs": "2448", "Average Protein Length": "292.0", "Coding Ratio (%)": "82.9", "Number of rRNAs": "1", "Number of tRNAs": "48", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 93.92, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_003134695.1", "gtdb_species": "s__Zemynaea palustris", "ani": 99.6741, "matched_fragments": 700, "total_fragments": 743, "gtdb_taxonomy": "d__Bacteria;p__Eremiobacterota;c__Eremiobacteria;o__Baltobacterales;f__Baltobacteraceae;g__Zemynaea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.68", "min_intra_species_ani": "99.42", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", 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76.4785, "matched_fragments": 201, "total_fragments": 743, "gtdb_taxonomy": "d__Bacteria;p__Eremiobacterota;c__Eremiobacteria;o__Baltobacterales;f__Baltobacteraceae;g__Elarobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.85", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.97", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCA_013036095.1", "gtdb_species": "s__Rubrimentiphilum sp013036095", "ani": 76.4731, "matched_fragments": 74, "total_fragments": 743, "gtdb_taxonomy": "d__Bacteria;p__Eremiobacterota;c__Eremiobacteria;o__Baltobacterales;f__Baltobacteraceae;g__Rubrimentiphilum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": null, "cell_length": null, "doubling_h": null, 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"Eremiobacterota", "Eremiobacteria", "Baltobacterales", "Baltobacteraceae", "Zemynaea", "Zemynaea", "palustris" ], "_meo": [ { "id": "MEO_0000204", "label": "peat" }, { "id": "MEO_0000093", "label": "permafrost" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }