{ "type": "genome", "identifier": "GCA_003450855.1", "organism": "Thauera sp.", "title": "Thauera sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Queensland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_003450855.1", "bioproject": "PRJNA417962", "biosample": "SAMN08017678", "wgs_master": "DMEP00000000.1", "refseq_category": "na", "taxid": "1905334", "species_taxid": "1905334", "organism_name": "Thauera sp.", "infraspecific_name": "", "isolate": "UBA12224", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/04", "asm_name": "ASM345085v1", "submitter": "University of Queensland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/450/855/GCA_003450855.1_ASM345085v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-04", "dateModified": "2018-09-04", "datePublished": "2018-09-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Thauera sp." ], "sample_taxid": [ "1905334" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "0.881 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 79.17, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3191102", "Number of Sequences": "478", "Longest Sequences (bp)": "35891", "N50 (bp)": "8114", "Gap Ratio (%)": "0.872426", "GCcontent (%)": "65.7", "Number of CDSs": "2584", "Average Protein Length": "297.3", "Coding Ratio (%)": "72.2", "Number of rRNAs": "0", "Number of tRNAs": "42", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Thauera phenylacetica", "strain": "strain=B4P", "accession": "GCA_000310225.1", "taxid": 164400, "species_taxid": 164400, "relation_to_type": "type", "validated": true, "ani": 84.3252, "matched_fragments": 499, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aminoaromatica", "strain": "strain=S2", "accession": "GCA_000310185.1", "taxid": 164330, "species_taxid": 164330, "relation_to_type": "type", "validated": true, "ani": 83.6344, "matched_fragments": 507, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera humireducens", "strain": "strain=SgZ-1", "accession": "GCA_001051995.2", "taxid": 1134435, "species_taxid": 1134435, "relation_to_type": "type", "validated": true, "ani": 83.1404, "matched_fragments": 500, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera propionica", "strain": "strain=KNDSS-Mac4", "accession": "GCA_002245655.1", "taxid": 2019431, "species_taxid": 2019431, "relation_to_type": "type", "validated": true, "ani": 83.1265, "matched_fragments": 467, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 82.7786, "matched_fragments": 471, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB1", "accession": "GCA_001922305.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 82.6744, "matched_fragments": 414, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera chlorobenzoica", "strain": "strain=3CB-1", "accession": "GCA_900108255.1", "taxid": 96773, "species_taxid": 96773, "relation_to_type": "type", "validated": true, "ani": 82.6709, "matched_fragments": 408, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera aromatica", "strain": "strain=K172", "accession": "GCA_003030465.1", "taxid": 59405, "species_taxid": 59405, "relation_to_type": "type", "validated": true, "ani": 82.3469, "matched_fragments": 403, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=47Lol = DSM 12138", "accession": "GCA_000310205.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 82.0898, "matched_fragments": 428, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=DSM 12138", "accession": "GCA_000621305.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 82.0518, "matched_fragments": 436, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum toluolicum", "strain": "strain=T", "accession": "GCA_012911005.2", "taxid": 90060, "species_taxid": 90060, "relation_to_type": "type", "validated": true, "ani": 79.9956, "matched_fragments": 372, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum anaerobium", "strain": "strain=LuFRes1", "accession": "GCA_012910705.2", "taxid": 182180, "species_taxid": 182180, "relation_to_type": "type", "validated": true, "ani": 79.3876, "matched_fragments": 311, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitrogeniibacter mangrovi", "strain": "strain=M9-3-2", "accession": "GCA_010983895.1", "taxid": 2016596, "species_taxid": 2016596, "relation_to_type": "type", "validated": true, "ani": 79.0268, "matched_fragments": 300, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum buckelii", "strain": "strain=U120", "accession": "GCA_012910785.2", "taxid": 200254, "species_taxid": 200254, "relation_to_type": "type", "validated": true, "ani": 78.882, "matched_fragments": 280, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitrogeniibacter aestuarii", "strain": "strain=H1-1-2A", "accession": "GCA_017309585.1", "taxid": 2815343, "species_taxid": 2815343, "relation_to_type": "type", "validated": true, "ani": 78.019, "matched_fragments": 212, "total_fragments": 817, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 79.17, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": 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