{
    "type": "genome",
    "identifier": "GCA_003519085.1",
    "organism": "Arthrobacter sp.",
    "title": "Arthrobacter sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Queensland",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_003519085.1",
        "bioproject": "PRJNA417962",
        "biosample": "SAMN08018842",
        "wgs_master": "DOXK00000000.1",
        "refseq_category": "na",
        "taxid": "1667",
        "species_taxid": "1667",
        "organism_name": "Arthrobacter sp.",
        "infraspecific_name": "",
        "isolate": "UBA10487",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/09/10",
        "asm_name": "ASM351908v1",
        "submitter": "University of Queensland",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/519/085/GCA_003519085.1_ASM351908v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-09-10",
    "dateModified": "2018-09-10",
    "datePublished": "2018-09-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Arthrobacter sp."
        ],
        "sample_taxid": [
            "1667"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "1.049 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 60.82,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3842902",
        "Number of Sequences": "370",
        "Longest Sequences (bp)": "72204",
        "N50 (bp)": "14088",
        "Gap Ratio (%)": "3.500428",
        "GCcontent (%)": "65.3",
        "Number of CDSs": "3234",
        "Average Protein Length": "282.3",
        "Coding Ratio (%)": "71.3",
        "Number of rRNAs": "0",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Pseudarthrobacter psychrotolerans",
                "strain": "strain=YJ56",
                "accession": "GCA_009911795.1",
                "taxid": 2697569,
                "species_taxid": 2697569,
                "relation_to_type": "type",
                "validated": true,
                "ani": 89.0508,
                "matched_fragments": 886,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter sulfonivorans",
                "strain": "strain=ALL",
                "accession": "GCA_014712225.1",
                "taxid": 121292,
                "species_taxid": 121292,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.7814,
                "matched_fragments": 766,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter polychromogenes",
                "strain": "strain=CGMCC 1.1927",
                "accession": "GCA_014644495.1",
                "taxid": 1676,
                "species_taxid": 1676,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.7556,
                "matched_fragments": 628,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter siccitolerans",
                "strain": "strain=4J27",
                "accession": "GCA_001046895.1",
                "taxid": 861266,
                "species_taxid": 861266,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.6769,
                "matched_fragments": 646,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter scleromae",
                "strain": "strain=CGMCC 1.3601",
                "accession": "GCA_014644515.1",
                "taxid": 158897,
                "species_taxid": 158897,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.4281,
                "matched_fragments": 634,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter phenanthrenivorans",
                "strain": "strain=Sphe3",
                "accession": "GCA_000189535.1",
                "taxid": 361575,
                "species_taxid": 361575,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.3213,
                "matched_fragments": 622,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter enclensis",
                "strain": "strain=NIO-1008",
                "accession": "GCA_900094675.1",
                "taxid": 993070,
                "species_taxid": 993070,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2711,
                "matched_fragments": 636,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter enclensis",
                "strain": "strain=NIO-1008",
                "accession": "GCA_001457025.1",
                "taxid": 993070,
                "species_taxid": 993070,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2711,
                "matched_fragments": 636,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter equi",
                "strain": "strain=IMMIB L-1606",
                "accession": "GCA_900105535.1",
                "taxid": 728066,
                "species_taxid": 728066,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2124,
                "matched_fragments": 645,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter globiformis",
                "strain": "strain=NBRC 12137",
                "accession": "GCA_000238915.2",
                "taxid": 1665,
                "species_taxid": 1665,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2105,
                "matched_fragments": 609,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter chlorophenolicus",
                "strain": "strain=A6",
                "accession": "GCA_000022025.1",
                "taxid": 85085,
                "species_taxid": 85085,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.1453,
                "matched_fragments": 643,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter pascens",
                "strain": "strain=DSM 20545",
                "accession": "GCA_017052465.1",
                "taxid": 1677,
                "species_taxid": 1677,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.1443,
                "matched_fragments": 600,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudarthrobacter chlorophenolicus",
                "strain": "strain=A6",
                "accession": "GCA_900104315.1",
                "taxid": 85085,
                "species_taxid": 85085,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0943,
                "matched_fragments": 651,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter ipis",
                "strain": "strain=IA7",
                "accession": "GCA_014694315.1",
                "taxid": 2716202,
                "species_taxid": 2716202,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.9942,
                "matched_fragments": 580,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter ulcerisalmonis",
                "strain": "",
                "accession": "GCA_900609065.1",
                "taxid": 2483813,
                "species_taxid": 2483813,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.2504,
                "matched_fragments": 496,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter silvisoli",
                "strain": "strain=NEAU-SA1",
                "accession": "GCA_003369445.1",
                "taxid": 2291022,
                "species_taxid": 2291022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1711,
                "matched_fragments": 504,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenarthrobacter nicotinovorans",
                "strain": "strain=ATCC 49919",
                "accession": "GCA_021919345.1",
                "taxid": 29320,
                "species_taxid": 29320,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 79.6825,
                "matched_fragments": 472,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter mobilis",
                "strain": "strain=E918",
                "accession": "GCA_012395835.1",
                "taxid": 2724944,
                "species_taxid": 2724944,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2451,
                "matched_fragments": 320,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter jiangjiafuii",
                "strain": "strain=zg-ZUI227",
                "accession": "GCA_018622995.1",
                "taxid": 2817475,
                "species_taxid": 2817475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0631,
                "matched_fragments": 278,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arthrobacter jiangjiafuii",
                "strain": "strain=zg-ZUI227",
                "accession": "GCA_017898065.1",
                "taxid": 2817475,
                "species_taxid": 2817475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0573,
                "matched_fragments": 276,
                "total_fragments": 1098,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 60.82,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002427975.1",
                "gtdb_species": "s__Pseudarthrobacter sp002427975",
                "ani": 99.3981,
                "matched_fragments": 869,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.44",
                "min_intra_species_ani": "99.44",
                "mean_intra_species_af": "0.84",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_009911795.1",
                "gtdb_species": "s__Pseudarthrobacter psychrotolerans",
                "ani": 89.0752,
                "matched_fragments": 885,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003287955.1",
                "gtdb_species": "s__Pseudarthrobacter sp003287955",
                "ani": 89.0456,
                "matched_fragments": 777,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001484605.1",
                "gtdb_species": "s__Pseudarthrobacter sulfonivorans_A",
                "ani": 88.9125,
                "matched_fragments": 797,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001428335.1",
                "gtdb_species": "s__Pseudarthrobacter sp001428335",
                "ani": 88.5228,
                "matched_fragments": 816,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_006517235.1",
                "gtdb_species": "s__Pseudarthrobacter sp002929755",
                "ani": 88.3317,
                "matched_fragments": 833,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.06",
                "min_intra_species_ani": "96.06",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002370555.1",
                "gtdb_species": "s__Pseudarthrobacter sp002370555",
                "ani": 88.1825,
                "matched_fragments": 759,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014712225.1",
                "gtdb_species": "s__Pseudarthrobacter sulfonivorans",
                "ani": 84.7814,
                "matched_fragments": 766,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004320525.1",
                "gtdb_species": "s__Pseudarthrobacter sp004320525",
                "ani": 83.9457,
                "matched_fragments": 739,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Pseudarthrobacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002994635.1",
                "gtdb_species": "s__Enhygromyxa salina_B",
                "ani": 74.7667,
                "matched_fragments": 58,
                "total_fragments": 1098,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Nannocystales;f__Nannocystaceae;g__Enhygromyxa",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.105,
        "cell_length": 0.019,
        "doubling_h": null,
        "growth_tmp": 26.947,
        "optimum_tmp": 26.833,
        "optimum_ph": 7.7,
        "genome_size": 4207472.204,
        "gc_content": 64.7,
        "coding_genes": 3997.0,
        "rRNA16S_genes": 7.0,
        "tRNA_genes": 50.0,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.235,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.03,
        "aerobic_respiration": 0.969,
        "mesophilic_range_tmp": 0.8,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.2,
        "bacillus_cell_shape": 0.466,
        "coccus_cell_shape": 0.333,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.2,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Micrococcaceae",
        "g__Arthrobacter",
        "s__Arthrobacter sp002427975"
    ],
    "_genome_taxon": [
        "Arthrobacter",
        "sp.",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Micrococcaceae",
        "g__Arthrobacter",
        "s__Arthrobacter sp002427975",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Micrococcaceae",
        "Arthrobacter",
        "Arthrobacter",
        "sp002427975"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}