{ "type": "genome", "identifier": "GCA_003521185.1", "organism": "Brevibacillus sp.", "title": "Brevibacillus sp.", "description": "unverified source organism; derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Queensland", "publication": [ {} ], "properties": { "assembly_accession": "GCA_003521185.1", "bioproject": "PRJNA417962", "biosample": "SAMN08019620", "wgs_master": "DOTK00000000.1", "refseq_category": "na", "taxid": "1882945", "species_taxid": "1882945", "organism_name": "Brevibacillus sp.", "infraspecific_name": "", "isolate": "UBA11289", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/10", "asm_name": "ASM352118v1", "submitter": "University of Queensland", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/521/185/GCA_003521185.1_ASM352118v1", "excluded_from_refseq": "unverified source organism; derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-10", "dateModified": "2018-09-10", "datePublished": "2018-09-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Brevibacillus sp." ], "sample_taxid": [ "1882945" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not applicable" ], "sample_host_location_id": [], "data_size": "1.679 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5897670", "Number of Sequences": "96", "Longest Sequences (bp)": "305645", "N50 (bp)": "90636", "Gap Ratio (%)": "0.024840", "GCcontent (%)": "52.1", "Number of CDSs": "5522", "Average Protein Length": "311.7", "Coding Ratio (%)": "87.5", "Number of rRNAs": "0", "Number of tRNAs": "54", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Brevibacillus parabrevis", "strain": "strain=NBRC 12334", "accession": "GCA_006539065.1", "taxid": 54914, "species_taxid": 54914, "relation_to_type": "type", "validated": true, "ani": 99.2371, "matched_fragments": 1817, "total_fragments": 1917, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brevibacillus parabrevis", "strain": "strain=NRRL NRS 605", "accession": "GCA_003710905.1", "taxid": 54914, "species_taxid": 54914, "relation_to_type": "type", "validated": true, "ani": 99.2368, "matched_fragments": 1853, "total_fragments": 1917, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Brevibacillus agri", "strain": "strain=NBRC 15538", "accession": "GCA_006540025.1", "taxid": 51101, "species_taxid": 51101, "relation_to_type": "type", "validated": true, "ani": 85.3483, "matched_fragments": 1317, "total_fragments": 1917, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevibacillus agri", "strain": "strain=NRRL NRS 1219", "accession": "GCA_003710885.1", "taxid": 51101, "species_taxid": 51101, "relation_to_type": "type", "validated": true, "ani": 85.3449, "matched_fragments": 1351, "total_fragments": 1917, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevibacillus agri", "strain": "strain=DSM 6348", "accession": "GCA_004117055.1", "taxid": 51101, "species_taxid": 51101, "relation_to_type": "type", "validated": true, "ani": 85.269, "matched_fragments": 1362, "total_fragments": 1917, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Brevibacillus gelatini", "strain": "strain=DSM 100115", "accession": "GCA_003710935.1", "taxid": 1655277, "species_taxid": 1655277, 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