{ "type": "genome", "identifier": "GCA_003577175.1", "organism": "Acidobacteriota bacterium", "title": "Acidobacteriota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Peking University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_003577175.1", "bioproject": "PRJNA450161", "biosample": "SAMN08931110", "wgs_master": "QEUO00000000.1", "refseq_category": "na", "taxid": "1978231", "species_taxid": "1978231", "organism_name": "Acidobacteriota bacterium", "infraspecific_name": "", "isolate": "ATN1", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/09/19", "asm_name": "ASM357717v1", "submitter": "Peking University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/577/175/GCA_003577175.1_ASM357717v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-09-19", "dateModified": "2018-09-19", "datePublished": "2018-09-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidobacteriota bacterium" ], "sample_taxid": [ "1978231" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Beijing" ], "sample_host_location_id": [], "data_size": "1.290 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4790008", "Number of Sequences": "268", "Longest Sequences (bp)": "146361", "N50 (bp)": "35293", "Gap Ratio (%)": "0.000501", "GCcontent (%)": "71.0", "Number of CDSs": "4236", "Average Protein Length": "319.4", "Coding Ratio (%)": "84.7", "Number of rRNAs": "0", "Number of tRNAs": "60", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Rhodococcus ruber", "strain": "strain=NBRC 15591", "accession": "GCA_001894945.1", "taxid": 1830, "species_taxid": 1830, "relation_to_type": "type", "validated": true, "ani": 99.5056, "matched_fragments": 1402, "total_fragments": 1448, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Rhodococcus ruber", "strain": "strain=DSM 43338", "accession": "GCA_001646835.1", "taxid": 1830, "species_taxid": 1830, "relation_to_type": "type", "validated": true, "ani": 99.4802, "matched_fragments": 1349, "total_fragments": 1448, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Rhodococcus aetherivorans", "strain": "strain=JCM 14343", "accession": "GCA_009176285.1", "taxid": 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