{ "type": "genome", "identifier": "GCA_003695925.1", "organism": "Deinococcota bacterium", "title": "Deinococcota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "California Institute of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCA_003695925.1", "bioproject": "PRJNA392119", "biosample": "SAMN10119911", "wgs_master": "RFFZ00000000.1", "refseq_category": "na", "taxid": "1913990", "species_taxid": "1913990", "organism_name": "Deinococcota bacterium", "infraspecific_name": "", "isolate": "J011", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/10/29", "asm_name": "ASM369592v1", "submitter": "California Institute of Technology", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/003/695/925/GCA_003695925.1_ASM369592v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-10-29", "dateModified": "2018-10-29", "datePublished": "2018-10-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Deinococcota bacterium" ], "sample_taxid": [ "1913990" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan: Tokyo Prefecture, Shikinejima Island, Jinata Onsen" ], "sample_host_location_id": [], "data_size": "0.701 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2521039", "Number of Sequences": "124", "Longest Sequences (bp)": "70062", "N50 (bp)": "30510", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "65.3", "Number of CDSs": "2416", "Average Protein Length": "312.3", "Coding Ratio (%)": "89.8", "Number of rRNAs": "0", "Number of tRNAs": "44", "Number of CRISPRs": "6" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Meiothermus ruber", "strain": "strain=DSM 1279", "accession": "GCA_000376665.1", "taxid": 277, "species_taxid": 277, "relation_to_type": "type", "validated": true, "ani": 80.306, "matched_fragments": 504, "total_fragments": 780, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Meiothermus ruber", "strain": "strain=DSM 1279", "accession": "GCA_000024425.1", "taxid": 277, "species_taxid": 277, "relation_to_type": "type", "validated": true, "ani": 80.278, "matched_fragments": 516, "total_fragments": 780, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Calidithermus timidus", 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