{ "type": "genome", "identifier": "GCA_004211255.1", "organism": "Rhodococcus sp. (in: high G+C Gram-positive bacteria)", "title": "Rhodococcus sp. (in: high G+C Gram-positive bacteria)", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of East Anglia", "publication": [ {} ], "properties": { "assembly_accession": "GCA_004211255.1", "bioproject": "PRJNA272922", "biosample": "SAMN10678666", "wgs_master": "SEES00000000.1", "refseq_category": "na", "taxid": "1831", "species_taxid": "1831", "organism_name": "Rhodococcus sp. (in: high G+C Gram-positive bacteria)", "infraspecific_name": "", "isolate": "PMG_126", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/19", "asm_name": "ASM421125v1", "submitter": "University of East Anglia", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/211/255/GCA_004211255.1_ASM421125v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-19", "dateModified": "2019-02-19", "datePublished": "2019-02-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodococcus sp. (in: high G+C Gram-positive bacteria)" ], "sample_taxid": [ "1831" ], "sample_host_organism": [ "Populus alba" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "United Kingdom: Norwich" ], "sample_host_location_id": [], "data_size": "1.580 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 74.29, "strain_heterogeneity": 12.09, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5637032", "Number of Sequences": "1439", "Longest Sequences (bp)": "39414", "N50 (bp)": "6480", "Gap Ratio (%)": "0.000550", "GCcontent (%)": "64.7", "Number of CDSs": "4236", "Average Protein Length": "290.0", "Coding Ratio (%)": "65.4", "Number of rRNAs": "0", "Number of tRNAs": "52", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": 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