{
    "type": "genome",
    "identifier": "GCA_004211355.1",
    "organism": "Rubrivivax sp.",
    "title": "Rubrivivax sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of East Anglia",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_004211355.1",
        "bioproject": "PRJNA272922",
        "biosample": "SAMN10678673",
        "wgs_master": "SEEZ00000000.1",
        "refseq_category": "na",
        "taxid": "50259",
        "species_taxid": "50259",
        "organism_name": "Rubrivivax sp.",
        "infraspecific_name": "",
        "isolate": "PMG_219",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/02/19",
        "asm_name": "ASM421135v1",
        "submitter": "University of East Anglia",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/211/355/GCA_004211355.1_ASM421135v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-02-19",
    "dateModified": "2019-02-19",
    "datePublished": "2019-02-19",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Rubrivivax sp."
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        "sample_taxid": [
            "50259"
        ],
        "sample_host_organism": [
            "Populus alba"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom: Norwich"
        ],
        "sample_host_location_id": [],
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        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
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        "contamination": 16.67,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
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    "data_type": "MAG",
    "data_source": "INSDC",
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        "Longest Sequences (bp)": "132585",
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        "Number of CDSs": "3824",
        "Average Protein Length": "341.3",
        "Coding Ratio (%)": "82.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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            {
                "organism_name": "Aquabacterium commune",
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                "organism_name": "Aquabacterium parvum",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aquabacterium lacunae",
                "strain": "strain=KMB7",
                "accession": "GCA_004310865.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
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                "accession": "GCA_003100395.1",
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                "status": "below_threshold"
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                "species_taxid": 450365,
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                "status": "below_threshold"
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                "organism_name": "Ideonella dechloratans",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Ideonella benzenivorans",
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            {
                "organism_name": "Hydrogenophaga crocea",
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                "accession": "GCA_011388215.1",
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            {
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                "status": "below_threshold"
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                "organism_name": "Paucibacter toxinivorans",
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        "gtdb_result": [
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        "Aquabacterium",
        "s",
        "",
        ""
    ],
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}