{ "type": "genome", "identifier": "GCA_004213965.1", "organism": "Flavobacteriales bacterium", "title": "Flavobacteriales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Universidad Miguel Hernandez", "publication": [ {} ], "properties": { "assembly_accession": "GCA_004213965.1", "bioproject": "PRJNA352798", "biosample": "SAMN10841242", "wgs_master": "SGZI00000000.1", "refseq_category": "na", "taxid": "2021391", "species_taxid": "2021391", "organism_name": "Flavobacteriales bacterium", "infraspecific_name": "", "isolate": "MED-G125", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/19", "asm_name": "ASM421396v1", "submitter": "Universidad Miguel Hernandez", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/213/965/GCA_004213965.1_ASM421396v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-19", "dateModified": "2019-02-19", "datePublished": "2019-02-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacteriales bacterium" ], "sample_taxid": [ "2021391" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain: off the coast of Alicante" ], "sample_host_location_id": [], "data_size": "0.299 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 45.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1079169", "Number of Sequences": "55", "Longest Sequences (bp)": "92572", "N50 (bp)": "24935", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "29.7", "Number of CDSs": "919", "Average Protein Length": "347.4", "Coding Ratio (%)": "88.8", "Number of rRNAs": "0", "Number of tRNAs": "19", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 45.83, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_004213965.1", "gtdb_species": "s__GCA-2700405 sp004213965", "ani": 100.0, "matched_fragments": 330, "total_fragments": 335, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__GCA-2700405", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_902512065.1", "gtdb_species": "s__GCA-2700405 sp902512065", 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