{ "type": "genome", "identifier": "GCA_004214175.1", "organism": "Flavobacteriales bacterium", "title": "Flavobacteriales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Universidad Miguel Hernandez", "publication": [ {} ], "properties": { "assembly_accession": "GCA_004214175.1", "bioproject": "PRJNA352798", "biosample": "SAMN10841241", "wgs_master": "SGZH00000000.1", "refseq_category": "na", "taxid": "2021391", "species_taxid": "2021391", "organism_name": "Flavobacteriales bacterium", "infraspecific_name": "", "isolate": "MED-G124", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/19", "asm_name": "ASM421417v1", "submitter": "Universidad Miguel Hernandez", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/214/175/GCA_004214175.1_ASM421417v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-19", "dateModified": "2019-02-19", "datePublished": "2019-02-19", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacteriales bacterium" ], "sample_taxid": [ "2021391" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Spain: off the coast of Alicante" ], "sample_host_location_id": [], "data_size": "0.372 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 73.48, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1330049", "Number of Sequences": "55", "Longest Sequences (bp)": "126557", "N50 (bp)": "34118", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "31.1", "Number of CDSs": "1136", "Average Protein Length": "341.3", "Coding Ratio (%)": "87.5", "Number of rRNAs": "0", "Number of tRNAs": "15", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Patiriisocius marinistellae", "strain": "strain=KK4", "accession": "GCA_009014635.1", "taxid": 2494560, "species_taxid": 2494560, "relation_to_type": "type", "validated": true, "ani": 76.5242, "matched_fragments": 51, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ulvibacter litoralis", "strain": "strain=KCTC 12104", "accession": "GCA_014651275.1", "taxid": 227084, "species_taxid": 227084, "relation_to_type": "type", "validated": true, "ani": 76.4965, "matched_fragments": 69, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ulvibacter litoralis", "strain": "strain=DSM 16195", "accession": "GCA_900102055.1", "taxid": 227084, "species_taxid": 227084, "relation_to_type": "type", "validated": true, "ani": 76.433, "matched_fragments": 69, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tamlana sedimentorum", "strain": "strain=JCM 19808", "accession": "GCA_000943565.1", "taxid": 1435349, "species_taxid": 1435349, "relation_to_type": "type", "validated": true, "ani": 76.241, "matched_fragments": 53, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polaribacter septentrionalilitoris", "strain": "strain=ANORD1", "accession": "GCA_009832745.1", "taxid": 2494657, "species_taxid": 2494657, "relation_to_type": "type", "validated": true, "ani": 76.2133, "matched_fragments": 50, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Patiriisocius marinus", "strain": "strain=NBRC 109484", "accession": "GCA_008974325.1", "taxid": 1397112, "species_taxid": 1397112, "relation_to_type": "type", "validated": true, "ani": 76.1949, "matched_fragments": 68, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014284085.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", "validated": true, "ani": 76.1532, "matched_fragments": 58, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella echinorum", "strain": "strain=KCTC 22026", "accession": "GCA_014297365.1", "taxid": 538189, "species_taxid": 538189, "relation_to_type": "type", "validated": true, "ani": 76.1532, "matched_fragments": 58, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomarinibacterium sedimenti", "strain": "strain=CAU 1614", "accession": "GCA_019312585.1", "taxid": 2857106, "species_taxid": 2857106, "relation_to_type": "type", "validated": true, "ani": 76.0672, "matched_fragments": 59, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina muelleri", "strain": "strain=DSM 19832", "accession": "GCA_000430665.1", "taxid": 279356, "species_taxid": 279356, "relation_to_type": "type", "validated": true, "ani": 75.9884, "matched_fragments": 50, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Seonamhaeicola algicola", "strain": "strain=Gy8", "accession": "GCA_007997385.1", "taxid": 1719036, "species_taxid": 1719036, "relation_to_type": "type", "validated": true, "ani": 75.9809, "matched_fragments": 53, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella litoriviva", "strain": "strain=KMM6491", "accession": "GCA_013249065.1", "taxid": 1220182, "species_taxid": 1220182, "relation_to_type": "type", "validated": true, "ani": 75.9808, "matched_fragments": 60, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquimarina muelleri", "strain": "strain=KCTC 12285", "accession": "GCA_014651355.1", "taxid": 279356, "species_taxid": 279356, "relation_to_type": "type", "validated": true, "ani": 75.9611, "matched_fragments": 51, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maribacter vaceletii", "strain": "strain=DSM 25230", "accession": "GCA_003634105.1", "taxid": 1206816, "species_taxid": 1206816, "relation_to_type": "type", "validated": true, "ani": 75.9423, "matched_fragments": 51, "total_fragments": 416, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 73.48, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_004214175.1", "gtdb_species": "s__GCA-002733185 sp004214175", "ani": 100.0, "matched_fragments": 413, 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