{ "type": "genome", "identifier": "GCA_004299305.1", "organism": "Methylobacter sp.", "title": "Methylobacter sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Oklahoma", "publication": [ {} ], "properties": { "assembly_accession": "GCA_004299305.1", "bioproject": "PRJNA514088", "biosample": "SAMN10720101", "wgs_master": "SCPZ00000000.1", "refseq_category": "na", "taxid": "2051955", "species_taxid": "2051955", "organism_name": "Methylobacter sp.", "infraspecific_name": "", "isolate": "DP16D_bin.19", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/02/25", "asm_name": "ASM429930v1", "submitter": "University of Oklahoma", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/299/305/GCA_004299305.1_ASM429930v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-02-25", "dateModified": "2019-02-25", "datePublished": "2019-02-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Methylobacter sp." ], "sample_taxid": [ "2051955" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Tennessee" ], "sample_host_location_id": [], "data_size": "1.283 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 97.92, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4490529", "Number of Sequences": "144", "Longest Sequences (bp)": "214456", "N50 (bp)": "50311", "Gap Ratio (%)": 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1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylomarinum vadi", "strain": "strain=IT-4", "accession": "GCA_000733935.1", "taxid": 438855, "species_taxid": 438855, "relation_to_type": "type", "validated": true, "ani": 76.1276, "matched_fragments": 104, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylomonas koyamae", "strain": "strain=JCM 16701", "accession": "GCA_001312005.1", "taxid": 702114, "species_taxid": 702114, "relation_to_type": "suspected-type", "validated": true, "ani": 75.9158, "matched_fragments": 107, "total_fragments": 1425, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 97.92, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_004299305.1", "gtdb_species": "s__Methylobacter_A sp004299305", "ani": 100.0, "matched_fragments": 1414, "total_fragments": 1425, "gtdb_taxonomy": 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