{
    "type": "genome",
    "identifier": "GCA_004367325.1",
    "organism": "Clostridium sp.",
    "title": "Clostridium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Marine Biological Laboratory",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_004367325.1",
        "bioproject": "PRJNA264811",
        "biosample": "SAMN10863486",
        "wgs_master": "SESZ00000000.1",
        "refseq_category": "na",
        "taxid": "1506",
        "species_taxid": "1506",
        "organism_name": "Clostridium sp.",
        "infraspecific_name": "",
        "isolate": "JdFRolivine-7",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/03/22",
        "asm_name": "ASM436732v1",
        "submitter": "Marine Biological Laboratory",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/367/325/GCA_004367325.1_ASM436732v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-03-22",
    "dateModified": "2019-03-22",
    "datePublished": "2019-03-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Clostridium sp."
        ],
        "sample_taxid": [
            "1506"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean: Hole 1301A, eastern flank of the Juan de Fuca Ridge"
        ],
        "sample_host_location_id": [],
        "data_size": "1.034 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3628647",
        "Number of Sequences": "408",
        "Longest Sequences (bp)": "58033",
        "N50 (bp)": "16487",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "39.8",
        "Number of CDSs": "3353",
        "Average Protein Length": "291.4",
        "Coding Ratio (%)": "80.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "8"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002376045.1",
                "gtdb_species": "s__UBA3567 sp002376045",
                "ani": 99.1004,
                "matched_fragments": 736,
                "total_fragments": 988,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Thermosediminibacteria;o__Koleobacterales;f__UBA3567;g__UBA3567",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.29",
                "min_intra_species_ani": "99.15",
                "mean_intra_species_af": "0.83",
                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.16,
        "cell_length": 0.434,
        "doubling_h": 0.353,
        "growth_tmp": 33.457,
        "optimum_tmp": 35.173,
        "optimum_ph": 6.947,
        "genome_size": 4165901.003,
        "gc_content": 29.49,
        "coding_genes": 3796.985,
        "rRNA16S_genes": 9.374,
        "tRNA_genes": 78.312,
        "gram_stain": 0.945,
        "sporulation": 0.967,
        "motility": 0.92,
        "range_salinity": 0.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.944,
        "thermophilic_range_tmp": 0.055,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Thermosediminibacteria",
        "o__Koleobacterales",
        "f__UBA3567",
        "g__UBA3567",
        "s__UBA3567 sp002376045"
    ],
    "_genome_taxon": [
        "Clostridium",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Thermosediminibacteria",
        "o__Koleobacterales",
        "f__UBA3567",
        "g__UBA3567",
        "s__UBA3567 sp002376045",
        "Bacteria",
        "Bacillota",
        "A",
        "Thermosediminibacteria",
        "Koleobacterales",
        "UBA3567",
        "UBA3567",
        "UBA3567",
        "sp002376045"
    ],
    "_meo": [
        {
            "id": "MEO_0000040",
            "label": "marine sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}