{
    "type": "genome",
    "identifier": "GCA_004555145.1",
    "organism": "Bacteroidales bacterium",
    "title": "Bacteroidales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Alberta",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_004555145.1",
        "bioproject": "PRJNA494875",
        "biosample": "SAMN10183659",
        "wgs_master": "SFJB00000000.1",
        "refseq_category": "na",
        "taxid": "2030927",
        "species_taxid": "2030927",
        "organism_name": "Bacteroidales bacterium",
        "infraspecific_name": "",
        "isolate": "W1P28.030",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/04/01",
        "asm_name": "ASM455514v1",
        "submitter": "University of Alberta",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/555/145/GCA_004555145.1_ASM455514v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-04-01",
    "dateModified": "2019-04-01",
    "datePublished": "2019-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidales bacterium"
        ],
        "sample_taxid": [
            "2030927"
        ],
        "sample_host_organism": [
            "Sus scrofa"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Edmonton"
        ],
        "sample_host_location_id": [],
        "data_size": "0.492 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 80.21,
        "contamination": 8.71,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1714228",
        "Number of Sequences": "186",
        "Longest Sequences (bp)": "47128",
        "N50 (bp)": "12313",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.6",
        "Number of CDSs": "1260",
        "Average Protein Length": "372.0",
        "Coding Ratio (%)": "82.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "23",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 80.21,
            "contamination": 8.71,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_004555145.1",
                "gtdb_species": "s__Cryptobacteroides sp004555145",
                "ani": 100.0,
                "matched_fragments": 464,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_900769905.1",
                "gtdb_species": "s__Cryptobacteroides sp900769905",
                "ani": 87.505,
                "matched_fragments": 329,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.32",
                "min_intra_species_ani": "98.32",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016295245.1",
                "gtdb_species": "s__Cryptobacteroides sp016295245",
                "ani": 78.4726,
                "matched_fragments": 107,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.61",
                "min_intra_species_ani": "98.61",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900541925.1",
                "gtdb_species": "s__Cryptobacteroides sp900541925",
                "ani": 78.1063,
                "matched_fragments": 140,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.89",
                "min_intra_species_ani": "97.86",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002439095.1",
                "gtdb_species": "s__Cryptobacteroides sp002439095",
                "ani": 77.9397,
                "matched_fragments": 126,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.02",
                "min_intra_species_ani": "98.66",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900319975.1",
                "gtdb_species": "s__Cryptobacteroides sp900319975",
                "ani": 77.8055,
                "matched_fragments": 115,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.34",
                "min_intra_species_ani": "97.18",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016291185.1",
                "gtdb_species": "s__Cryptobacteroides sp016291185",
                "ani": 77.7967,
                "matched_fragments": 100,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000432655.1",
                "gtdb_species": "s__Cryptobacteroides sp000432655",
                "ani": 77.7444,
                "matched_fragments": 133,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.19",
                "min_intra_species_ani": "97.59",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.80",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_902768985.1",
                "gtdb_species": "s__Cryptobacteroides sp902768985",
                "ani": 77.7402,
                "matched_fragments": 116,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.65",
                "min_intra_species_ani": "98.07",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_900167895.1",
                "gtdb_species": "s__Cryptobacteroides sp900167895",
                "ani": 77.7334,
                "matched_fragments": 121,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.18",
                "min_intra_species_ani": "97.90",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017535125.1",
                "gtdb_species": "s__Cryptobacteroides sp017535125",
                "ani": 77.6585,
                "matched_fragments": 92,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902789245.1",
                "gtdb_species": "s__Cryptobacteroides sp902789245",
                "ani": 77.6321,
                "matched_fragments": 113,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.35",
                "min_intra_species_ani": "96.71",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.86",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002438805.1",
                "gtdb_species": "s__Cryptobacteroides sp002438805",
                "ani": 77.6213,
                "matched_fragments": 133,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.44",
                "min_intra_species_ani": "99.33",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_004552965.1",
                "gtdb_species": "s__Cryptobacteroides sp004552965",
                "ani": 77.5651,
                "matched_fragments": 65,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.55",
                "min_intra_species_ani": "98.04",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCA_017477245.1",
                "gtdb_species": "s__Cryptobacteroides sp017477245",
                "ani": 77.4915,
                "matched_fragments": 114,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.05",
                "min_intra_species_ani": "97.38",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017561865.1",
                "gtdb_species": "s__Cryptobacteroides sp017561865",
                "ani": 77.3289,
                "matched_fragments": 70,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905234475.1",
                "gtdb_species": "s__Cryptobacteroides sp905234475",
                "ani": 77.3097,
                "matched_fragments": 105,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900544195.1",
                "gtdb_species": "s__Cryptobacteroides sp900544195",
                "ani": 77.1494,
                "matched_fragments": 54,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.99",
                "min_intra_species_ani": "97.97",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_001602885.1",
                "gtdb_species": "s__Cryptobacteroides sp001602885",
                "ani": 77.0067,
                "matched_fragments": 51,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_000431015.1",
                "gtdb_species": "s__Cryptobacteroides sp000431015",
                "ani": 76.8454,
                "matched_fragments": 57,
                "total_fragments": 469,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__UBA932;g__Cryptobacteroides",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.39",
                "min_intra_species_ani": "98.13",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 9,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.217,
        "cell_length": 0.157,
        "doubling_h": 0.206,
        "growth_tmp": 36.585,
        "optimum_tmp": 36.041,
        "optimum_ph": 7.086,
        "genome_size": 3658719.825,
        "gc_content": 44.947,
        "coding_genes": 3043.648,
        "rRNA16S_genes": 4.032,
        "tRNA_genes": 57.661,
        "gram_stain": 0.014,
        "sporulation": 0.0,
        "motility": 0.04,
        "range_salinity": 0.0,
        "facultative_respiration": 0.006,
        "anaerobic_respiration": 0.958,
        "aerobic_respiration": 0.034,
        "mesophilic_range_tmp": 0.985,
        "thermophilic_range_tmp": 0.014,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.95,
        "coccus_cell_shape": 0.024,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.024,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__UBA932",
        "g__Cryptobacteroides",
        "s__Cryptobacteroides sp004555145"
    ],
    "_genome_taxon": [
        "Bacteroidales",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__UBA932",
        "g__Cryptobacteroides",
        "s__Cryptobacteroides sp004555145",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "UBA932",
        "Cryptobacteroides",
        "Cryptobacteroides",
        "sp004555145"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}