{
    "type": "genome",
    "identifier": "GCA_004555405.1",
    "organism": "Subdoligranulum sp.",
    "title": "Subdoligranulum sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Alberta",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_004555405.1",
        "bioproject": "PRJNA494875",
        "biosample": "SAMN10183609",
        "wgs_master": "SFIE00000000.1",
        "refseq_category": "na",
        "taxid": "2053618",
        "species_taxid": "2053618",
        "organism_name": "Subdoligranulum sp.",
        "infraspecific_name": "",
        "isolate": "W1P18.021",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/04/01",
        "asm_name": "ASM455540v1",
        "submitter": "University of Alberta",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/555/405/GCA_004555405.1_ASM455540v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-04-01",
    "dateModified": "2019-04-01",
    "datePublished": "2019-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Subdoligranulum sp."
        ],
        "sample_taxid": [
            "2053618"
        ],
        "sample_host_organism": [
            "Sus scrofa"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Edmonton"
        ],
        "sample_host_location_id": [],
        "data_size": "0.601 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2151898",
        "Number of Sequences": "68",
        "Longest Sequences (bp)": "162167",
        "N50 (bp)": "50019",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "56.5",
        "Number of CDSs": "1946",
        "Average Protein Length": "318.9",
        "Coding Ratio (%)": "86.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Faecalibacterium gallinarum",
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            {
                "organism_name": "Faecalibacterium duncaniae",
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            {
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            {
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                "organism_name": "Subdoligranulum variabile",
                "strain": "strain=DSM 15176",
                "accession": "GCA_025152575.1",
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                "species_taxid": 214851,
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            },
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                "organism_name": "Faecalibacterium hattorii",
                "strain": "strain=APC922/41-1",
                "accession": "GCA_003287455.1",
                "taxid": 2935520,
                "species_taxid": 2935520,
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                "ani": 77.5351,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fournierella massiliensis",
                "strain": "strain=DSM 100451",
                "accession": "GCA_004345265.1",
                "taxid": 1650663,
                "species_taxid": 1650663,
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                "ani": 77.3768,
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                "ani_threshold": 95,
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            {
                "organism_name": "Pygmaiobacter massiliensis",
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                "species_taxid": 1917873,
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                "status": "below_threshold"
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            "contamination": 0.0,
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                "gtdb_species": "s__Ruthenibacterium sp905212515",
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                "total_fragments": 687,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Ruthenibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
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        "cell_diameter": -0.222,
        "cell_length": null,
        "doubling_h": null,
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        "optimum_tmp": 37.0,
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        "genome_size": 3241471.0,
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        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "aerobic_respiration": 0.0,
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        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Ruminococcaceae",
        "g__SFIE01",
        "s__SFIE01 sp004555405"
    ],
    "_genome_taxon": [
        "Subdoligranulum",
        "sp.",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Ruminococcaceae",
        "g__SFIE01",
        "s__SFIE01 sp004555405",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Ruminococcaceae",
        "SFIE01",
        "SFIE01",
        "sp004555405"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}