{
    "type": "genome",
    "identifier": "GCA_004557945.1",
    "organism": "Bacteroidales bacterium",
    "title": "Bacteroidales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Alberta",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_004557945.1",
        "bioproject": "PRJNA494875",
        "biosample": "SAMN10183640",
        "wgs_master": "SFFG00000000.1",
        "refseq_category": "na",
        "taxid": "2030927",
        "species_taxid": "2030927",
        "organism_name": "Bacteroidales bacterium",
        "infraspecific_name": "",
        "isolate": "W0P39.004",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/04/01",
        "asm_name": "ASM455794v1",
        "submitter": "University of Alberta",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/004/557/945/GCA_004557945.1_ASM455794v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-04-01",
    "dateModified": "2019-04-01",
    "datePublished": "2019-04-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacteroidales bacterium"
        ],
        "sample_taxid": [
            "2030927"
        ],
        "sample_host_organism": [
            "Sus scrofa"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Edmonton"
        ],
        "sample_host_location_id": [],
        "data_size": "0.842 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2938301",
        "Number of Sequences": "510",
        "Longest Sequences (bp)": "54076",
        "N50 (bp)": "6789",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "47.5",
        "Number of CDSs": "2296",
        "Average Protein Length": "294.2",
        "Coding Ratio (%)": "69.0",
        "Number of rRNAs": "5",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Sodaliphilus pleomorphus",
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                "accession": "GCA_009676955.1",
                "taxid": 2606626,
                "species_taxid": 2606626,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3024,
                "matched_fragments": 101,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sodaliphilus pleomorphus",
                "strain": "strain=Oil-RF-744-WCA-WT-10",
                "accession": "GCA_009696565.1",
                "taxid": 2606626,
                "species_taxid": 2606626,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2885,
                "matched_fragments": 96,
                "total_fragments": 701,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCA_004557565.1",
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                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Sodaliphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.84",
                "min_intra_species_ani": "96.54",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.65",
                "num_clustered_genomes": 13,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002476625.1",
                "gtdb_species": "s__Sodaliphilus sp002476625",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Sodaliphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004559845.1",
                "gtdb_species": "s__Sodaliphilus sp004559845",
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                "matched_fragments": 185,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Sodaliphilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.70",
                "min_intra_species_ani": "97.51",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_004557385.1",
                "gtdb_species": "s__SFTJ01 sp004557385",
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                "matched_fragments": 64,
                "total_fragments": 701,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__SFTJ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.97",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_018065815.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Muribaculaceae;g__Sodaliphilus",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900770215.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016287065.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017619355.1",
                "gtdb_species": "s__Sodaliphilus sp017619355",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
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                "mean_intra_species_ani": "98.54",
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            {
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                "status": "-"
            },
            {
                "accession": "GCA_902762385.1",
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            {
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            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.217,
        "cell_length": 0.157,
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        "growth_tmp": 36.585,
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        "coding_genes": 3043.648,
        "rRNA16S_genes": 4.032,
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        "facultative_respiration": 0.006,
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        "mesophilic_range_tmp": 0.985,
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        "bacillus_cell_shape": 0.95,
        "coccus_cell_shape": 0.024,
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        "spiral_cell_shape": 0.0
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    "_gtdb_taxon": [
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        "p__Bacteroidota",
        "c__Bacteroidia",
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        "f__Muribaculaceae",
        "g__Sodaliphilus",
        "s__Sodaliphilus sp004557565"
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    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Bacteroidales",
        "f__Muribaculaceae",
        "g__Sodaliphilus",
        "s__Sodaliphilus sp004557565",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Bacteroidales",
        "Muribaculaceae",
        "Sodaliphilus",
        "Sodaliphilus",
        "sp004557565"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}