{
    "type": "genome",
    "identifier": "GCA_005790565.1",
    "organism": "Planctomycetia bacterium",
    "title": "Planctomycetia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Nanjing Institute of Geography & Limnology, Chinese Academy of Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_005790565.1",
        "bioproject": "PRJNA531348",
        "biosample": "SAMN11368963",
        "wgs_master": "SXUJ00000000.1",
        "refseq_category": "na",
        "taxid": "2052181",
        "species_taxid": "2052181",
        "organism_name": "Planctomycetia bacterium",
        "infraspecific_name": "",
        "isolate": "F1-140-MAGs142",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/05/24",
        "asm_name": "ASM579056v1",
        "submitter": "Nanjing Institute of Geography & Limnology, Chinese Academy of Sciences",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/790/565/GCA_005790565.1_ASM579056v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-05-24",
    "dateModified": "2019-05-24",
    "datePublished": "2019-05-24",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Planctomycetia bacterium"
        ],
        "sample_taxid": [
            "2052181"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Fuxian Lake, Yuxi"
        ],
        "sample_host_location_id": [],
        "data_size": "0.749 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 404.0,
            "max": 404.0
        },
        "completeness": 96.18,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2660657",
        "Number of Sequences": "177",
        "Longest Sequences (bp)": "63725",
        "N50 (bp)": "21455",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.6",
        "Number of CDSs": "2071",
        "Average Protein Length": "355.9",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 96.18,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005790565.1",
                "gtdb_species": "s__F1-140-MAGs142 sp005790565",
                "ani": 100.0,
                "matched_fragments": 794,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__F1-140-MAGs142",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.70",
                "min_intra_species_ani": "99.68",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_005790605.1",
                "gtdb_species": "s__F1-140-MAGs142 sp005790605",
                "ani": 79.0495,
                "matched_fragments": 442,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__F1-140-MAGs142",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.95",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_009691805.1",
                "gtdb_species": "s__F1-140-MAGs142 sp009691805",
                "ani": 77.8953,
                "matched_fragments": 365,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__F1-140-MAGs142",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003671055.1",
                "gtdb_species": "s__F1-140-MAGs142 sp003671055",
                "ani": 77.3183,
                "matched_fragments": 288,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__F1-140-MAGs142",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.26",
                "min_intra_species_ani": "99.00",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903891095.1",
                "gtdb_species": "s__QWPT01 sp903891095",
                "ani": 76.3617,
                "matched_fragments": 106,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.40",
                "min_intra_species_ani": "98.92",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_003671075.1",
                "gtdb_species": "s__QWPT01 sp003671075",
                "ani": 76.2201,
                "matched_fragments": 74,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.44",
                "min_intra_species_ani": "97.81",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_016795035.1",
                "gtdb_species": "s__JAEUIT01 sp016795035",
                "ani": 75.7977,
                "matched_fragments": 50,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__JAEUIT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016124975.1",
                "gtdb_species": "s__QWPT01 sp016124975",
                "ani": 75.7658,
                "matched_fragments": 96,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003671025.1",
                "gtdb_species": "s__QWPT01 sp003671025",
                "ani": 75.6973,
                "matched_fragments": 79,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.38",
                "min_intra_species_ani": "99.11",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903911205.1",
                "gtdb_species": "s__QWPT01 sp903911205",
                "ani": 75.5827,
                "matched_fragments": 74,
                "total_fragments": 805,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Phycisphaerae;o__Phycisphaerales;f__SM1A02;g__QWPT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__F1-140-MAGs142",
        "s__F1-140-MAGs142 sp005790565"
    ],
    "_genome_taxon": [
        "Planctomycetia",
        "bacterium",
        "d__Bacteria",
        "p__Planctomycetota",
        "c__Phycisphaerae",
        "o__Phycisphaerales",
        "f__SM1A02",
        "g__F1-140-MAGs142",
        "s__F1-140-MAGs142 sp005790565",
        "Bacteria",
        "Planctomycetota",
        "Phycisphaerae",
        "Phycisphaerales",
        "SM1A02",
        "F1-140-MAGs142",
        "F1-140-MAGs142",
        "sp005790565"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}