{
    "type": "genome",
    "identifier": "GCA_005885085.1",
    "organism": "Actinomycetota bacterium",
    "title": "Actinomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Jill Banfield's Lab at Berkeley",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_005885085.1",
        "bioproject": "PRJNA449266",
        "biosample": "SAMN11380226",
        "wgs_master": "VAXY00000000.1",
        "refseq_category": "na",
        "taxid": "2900548",
        "species_taxid": "2900548",
        "organism_name": "Actinomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "AC_44",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/05/29",
        "asm_name": "ASM588508v1",
        "submitter": "Jill Banfield's Lab at Berkeley",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/005/885/085/GCA_005885085.1_ASM588508v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-05-29",
    "dateModified": "2019-05-29",
    "datePublished": "2019-05-29",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Angelo Coast Range Reserve, CA"
        ],
        "sample_host_location_id": [],
        "data_size": "0.717 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 86.7,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2629224",
        "Number of Sequences": "291",
        "Longest Sequences (bp)": "53734",
        "N50 (bp)": "11482",
        "Gap Ratio (%)": "0.410045",
        "GCcontent (%)": "68.7",
        "Number of CDSs": "2575",
        "Average Protein Length": "275.0",
        "Coding Ratio (%)": "80.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "40",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Gaiella occulta",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Conexibacter woesei",
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                "accession": "GCA_000025265.1",
                "taxid": 191495,
                "species_taxid": 191495,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Conexibacter arvalis",
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                "accession": "GCA_014199525.1",
                "taxid": 912552,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Miltoncostaea oceani",
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                "species_taxid": 2843216,
                "relation_to_type": "type",
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                "matched_fragments": 114,
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                "status": "below_threshold"
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            {
                "organism_name": "Miltoncostaea marina",
                "strain": "strain=SCSIO 60955",
                "accession": "GCA_018141525.1",
                "taxid": 2843215,
                "species_taxid": 2843215,
                "relation_to_type": "type",
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                "status": "below_threshold"
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            {
                "organism_name": "Baekduia soli",
                "strain": "strain=BR7-21",
                "accession": "GCA_007970665.1",
                "taxid": 496014,
                "species_taxid": 496014,
                "relation_to_type": "type",
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                "matched_fragments": 135,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Capillimicrobium parvum",
                "strain": "strain=0166_1",
                "accession": "GCA_021172045.1",
                "taxid": 2884022,
                "species_taxid": 2884022,
                "relation_to_type": "type",
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                "ani": 75.3801,
                "matched_fragments": 173,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraconexibacter algicola",
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                "accession": "GCA_003044185.1",
                "taxid": 2133960,
                "species_taxid": 2133960,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter medicamentivorans",
                "strain": "strain=I11",
                "accession": "GCA_000240225.2",
                "taxid": 1097667,
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                "status": "below_threshold"
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            {
                "organism_name": "Lentzea jiangxiensis",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Microbispora corallina",
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                "accession": "GCA_016863035.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Patulibacter minatonensis",
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                "accession": "GCA_000519325.1",
                "taxid": 298163,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Microbacterium album",
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                "accession": "GCA_014643695.1",
                "taxid": 2053191,
                "species_taxid": 2053191,
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                "validated": true,
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                "matched_fragments": 58,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gryllotalpicola protaetiae",
                "strain": "strain=2DFW10M-5",
                "accession": "GCA_003627055.1",
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                "status": "below_threshold"
            }
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            "contamination": 0.0,
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        "gtdb_result": [
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    "_gtdb_taxon": [
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        "s__3-1-20CM-4-69-9 sp005885085"
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        "s__3-1-20CM-4-69-9 sp005885085",
        "Bacteria",
        "Actinomycetota",
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        "3-1-20CM-4-69-9",
        "3-1-20CM-4-69-9",
        "sp005885085"
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    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        },
        {
            "id": "MEO_0001926",
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        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}