{ "tc_result": [ { "organism_name": "Rugosimonospora africana", "strain": "strain=NBRC 104875", "accession": "GCA_016862975.1", "taxid": 556532, "species_taxid": 556532, "relation_to_type": "type", "validated": true, "ani": 79.1677, "matched_fragments": 512, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora olivasterospora", "strain": "strain=DSM 43868", "accession": "GCA_007830265.1", "taxid": 1880, "species_taxid": 1880, "relation_to_type": "type", "validated": true, "ani": 78.8752, "matched_fragments": 405, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora deserti", "strain": "strain=13K206", "accession": "GCA_003236335.1", "taxid": 2070366, "species_taxid": 2070366, "relation_to_type": "type", "validated": true, "ani": 78.7925, "matched_fragments": 400, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora rubida", "strain": "strain=NEAU-HG-1", "accession": "GCA_009908295.1", "taxid": 2697657, "species_taxid": 2697657, "relation_to_type": "type", "validated": true, "ani": 78.6479, "matched_fragments": 422, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora echinaurantiaca", "strain": "strain=DSM 43904", "accession": "GCA_900090235.1", "taxid": 47857, "species_taxid": 47857, "relation_to_type": "type", "validated": true, "ani": 78.6277, "matched_fragments": 458, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora craniellae", "strain": "strain=LHW63014", "accession": "GCA_003419945.1", "taxid": 2294034, "species_taxid": 2294034, "relation_to_type": "type", "validated": true, "ani": 78.5282, "matched_fragments": 359, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora craniellae", "strain": "strain=LHW63014", "accession": "GCA_014764405.1", "taxid": 2294034, "species_taxid": 2294034, "relation_to_type": "type", "validated": true, "ani": 78.4965, "matched_fragments": 365, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora rifamycinica", "strain": "strain=DSM 44983", "accession": "GCA_900090265.1", "taxid": 291594, "species_taxid": 291594, "relation_to_type": "type", "validated": true, "ani": 78.4856, "matched_fragments": 420, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora rifamycinica", "strain": "strain=AM105", "accession": "GCA_001542325.1", "taxid": 291594, "species_taxid": 291594, "relation_to_type": "type", "validated": true, "ani": 78.4695, "matched_fragments": 404, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora citrea", "strain": "strain=DSM 43903", "accession": "GCA_900090315.1", "taxid": 47855, "species_taxid": 47855, "relation_to_type": "type", "validated": true, "ani": 78.4452, "matched_fragments": 446, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora sagamiensis", "strain": "strain=DSM 43912", "accession": "GCA_007829995.1", "taxid": 47875, "species_taxid": 47875, "relation_to_type": "type", "validated": true, "ani": 78.3641, "matched_fragments": 398, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora polyrhachis", "strain": "strain=DSM 45886", "accession": "GCA_014203835.1", "taxid": 1282883, "species_taxid": 1282883, "relation_to_type": "type", "validated": true, "ani": 78.3301, "matched_fragments": 325, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Micromonospora maris", "strain": "strain=NRRL B-24793", "accession": "GCA_001507315.1", "taxid": 1003110, "species_taxid": 1003110, "relation_to_type": "type", "validated": true, "ani": 78.3069, "matched_fragments": 362, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytohabitans suffuscus", "strain": "strain=NBRC 105367", "accession": "GCA_011764565.1", "taxid": 624315, "species_taxid": 624315, "relation_to_type": "type", "validated": true, "ani": 78.091, "matched_fragments": 462, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytohabitans rumicis", "strain": "strain=NBRC 108638", "accession": "GCA_011764445.1", "taxid": 1076125, "species_taxid": 1076125, "relation_to_type": "type", "validated": true, "ani": 78.0803, "matched_fragments": 466, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pilimelia anulata", "strain": "strain=JCM 3090", "accession": "GCA_014647895.1", "taxid": 53371, "species_taxid": 53371, "relation_to_type": "type", "validated": true, "ani": 78.0199, "matched_fragments": 379, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phytohabitans flavus", "strain": "strain=NBRC 107702", "accession": "GCA_011764545.1", "taxid": 1076124, "species_taxid": 1076124, "relation_to_type": "type", "validated": true, "ani": 77.8256, "matched_fragments": 431, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pilimelia terevasa", "strain": "strain=JCM 3091", "accession": "GCA_014647915.1", "taxid": 53372, "species_taxid": 53372, "relation_to_type": "type", "validated": true, "ani": 77.6921, "matched_fragments": 336, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora vulcania", "strain": "strain=NEAU-JM1", "accession": "GCA_009720385.1", "taxid": 1460450, "species_taxid": 1460450, "relation_to_type": "type", "validated": true, "ani": 77.5736, "matched_fragments": 403, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Catellatospora sichuanensis", "strain": "strain=H14505", "accession": "GCA_007483665.1", "taxid": 1969805, "species_taxid": 1969805, "relation_to_type": "type", "validated": true, "ani": 77.4634, "matched_fragments": 401, "total_fragments": 845, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 69.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_005885115.1", "gtdb_species": "s__Rugosimonospora sp005885115", "ani": 99.9999, "matched_fragments": 834, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Rugosimonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_005885555.1", "gtdb_species": "s__Rugosimonospora sp005885555", "ani": 81.7021, "matched_fragments": 628, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Rugosimonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016862975.1", "gtdb_species": "s__Rugosimonospora africana", "ani": 79.1946, "matched_fragments": 509, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Rugosimonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016863255.1", "gtdb_species": "s__Planosporangium mesophilum", "ani": 78.5497, "matched_fragments": 409, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Planosporangium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900090265.1", "gtdb_species": "s__Micromonospora rifamycinica", "ani": 78.5331, "matched_fragments": 416, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014764405.1", "gtdb_species": "s__Micromonospora craniellae", "ani": 78.5079, "matched_fragments": 364, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014203835.1", "gtdb_species": "s__Micromonospora_H polyrhachis", "ani": 78.3311, "matched_fragments": 325, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora_H", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016863495.1", "gtdb_species": "s__Micromonospora andamanensis", "ani": 78.2813, "matched_fragments": 354, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.71", "min_intra_species_ani": "95.67", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.84", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003751085.1", "gtdb_species": "s__Micromonospora_E sp003751085", "ani": 78.1838, "matched_fragments": 384, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Micromonospora_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002846275.1", "gtdb_species": "s__Plantactinospora sp002846275", "ani": 78.1681, "matched_fragments": 418, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Plantactinospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011764445.1", "gtdb_species": "s__Phytohabitans rumicis", "ani": 78.1307, "matched_fragments": 458, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Phytohabitans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014647895.1", "gtdb_species": "s__Pilimelia anulata", "ani": 78.0971, "matched_fragments": 372, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Pilimelia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003762835.1", "gtdb_species": "s__Plantactinospora sp003762835", "ani": 78.0737, "matched_fragments": 370, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Plantactinospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009720385.1", "gtdb_species": "s__Catellatospora vulcania", "ani": 77.5544, "matched_fragments": 407, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007483665.1", "gtdb_species": "s__Catellatospora sichuanensis", "ani": 77.4777, "matched_fragments": 399, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_015704865.1", "gtdb_species": "s__Actinoplanes sp015704865", "ani": 77.4365, "matched_fragments": 395, "total_fragments": 845, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Actinoplanes", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }