{ "tc_result": [ { "organism_name": "Rhabdonatronobacter sediminivivens", "strain": "strain=IM2376", "accession": "GCA_013415485.1", "taxid": 2743469, "species_taxid": 2743469, "relation_to_type": "type", "validated": true, "ani": 81.5533, "matched_fragments": 448, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum strictum", "strain": "strain=DSM 11289", "accession": "GCA_009649175.1", "taxid": 58314, "species_taxid": 58314, "relation_to_type": "type", "validated": true, "ani": 77.9497, "matched_fragments": 202, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alkalilacustris brevis", "strain": "strain=34079", "accession": "GCA_003350345.1", "taxid": 2026338, "species_taxid": 2026338, "relation_to_type": "type", "validated": true, "ani": 77.9159, "matched_fragments": 214, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=ZS2-28", "accession": "GCA_014681765.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 77.6774, "matched_fragments": 205, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseicitreum antarcticum", "strain": "strain=CGMCC 1.8894", "accession": "GCA_900107025.1", "taxid": 564137, "species_taxid": 564137, "relation_to_type": "type", "validated": true, "ani": 77.5966, "matched_fragments": 203, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum steppense", "strain": "strain=DSM 21153", "accession": "GCA_004339675.1", "taxid": 540251, "species_taxid": 540251, "relation_to_type": "type", "validated": true, "ani": 77.5838, "matched_fragments": 208, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseinatronobacter thiooxidans", "strain": "strain=ALG1", "accession": "GCA_001870675.1", "taxid": 121821, "species_taxid": 121821, "relation_to_type": "type", "validated": true, "ani": 77.5032, "matched_fragments": 189, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum tesquicola", "strain": "strain=A-36s", "accession": "GCA_024128855.1", "taxid": 540254, "species_taxid": 540254, "relation_to_type": "type", "validated": true, "ani": 77.4425, "matched_fragments": 204, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter caeruleus", "strain": "strain=N8", "accession": "GCA_008271655.1", "taxid": 2595004, "species_taxid": 2595004, "relation_to_type": "type", "validated": true, "ani": 77.4252, "matched_fragments": 193, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pararhodobacter marinus", "strain": "strain=CIC4N-9", "accession": "GCA_003122215.1", "taxid": 2184063, "species_taxid": 2184063, "relation_to_type": "type", "validated": true, "ani": 77.3938, "matched_fragments": 213, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca barguzinensis", "strain": "strain=alga05", "accession": "GCA_001870665.2", "taxid": 441209, "species_taxid": 441209, "relation_to_type": "suspected-type", "validated": true, "ani": 77.389, "matched_fragments": 166, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca barguzinensis", "strain": "strain=DSM 19920", "accession": "GCA_004365885.1", "taxid": 441209, "species_taxid": 441209, "relation_to_type": "suspected-type", "validated": true, "ani": 77.388, "matched_fragments": 166, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum euryhalinum", "strain": "strain=DSM 4868", "accession": "GCA_004342445.1", "taxid": 35805, "species_taxid": 35805, "relation_to_type": "type", "validated": true, "ani": 77.3702, "matched_fragments": 202, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca bogoriensis", "strain": "strain=DSM 18756", "accession": "GCA_004366635.1", "taxid": 119542, "species_taxid": 119542, "relation_to_type": "suspected-type", "validated": true, "ani": 77.3003, "matched_fragments": 168, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseibaca ekhonensis", "strain": "strain=CECT 7235", "accession": "GCA_900499075.1", "taxid": 254356, "species_taxid": 254356, "relation_to_type": "type", "validated": true, "ani": 77.2981, "matched_fragments": 169, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobaca bogoriensis", "strain": "strain=LBB1", "accession": "GCA_014197665.1", "taxid": 119542, "species_taxid": 119542, "relation_to_type": "suspected-type", "validated": true, "ani": 77.2947, "matched_fragments": 166, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus versutus", "strain": "strain=DSM 582", "accession": "GCA_003387045.1", "taxid": 34007, "species_taxid": 34007, "relation_to_type": "type", "validated": true, "ani": 77.2158, "matched_fragments": 216, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter ovatus", "strain": "strain=JA234", "accession": "GCA_900207575.1", "taxid": 439529, "species_taxid": 439529, "relation_to_type": "type", "validated": true, "ani": 77.1815, "matched_fragments": 186, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus alkenifer", "strain": "strain=DSM 11593", "accession": "GCA_900108405.1", "taxid": 65735, "species_taxid": 65735, "relation_to_type": "type", "validated": true, "ani": 77.1532, "matched_fragments": 153, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus versutus", "strain": "strain=DSM 582", "accession": "GCA_000763885.1", "taxid": 34007, "species_taxid": 34007, "relation_to_type": "type", "validated": true, "ani": 77.1486, "matched_fragments": 213, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus fontiphilus", "strain": "strain=MVW-1", "accession": "GCA_017356265.1", "taxid": 1815556, "species_taxid": 1815556, "relation_to_type": "type", "validated": true, "ani": 77.1345, "matched_fragments": 168, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter sediminicola", "strain": "strain=JA983", "accession": "GCA_007668225.1", "taxid": 2584941, "species_taxid": 2584941, "relation_to_type": "type", "validated": true, "ani": 77.075, "matched_fragments": 164, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tabrizicola sediminis", "strain": "strain=DRYC-M-16", "accession": "GCA_004745575.1", "taxid": 2486418, "species_taxid": 2486418, "relation_to_type": "type", "validated": true, "ani": 76.7224, "matched_fragments": 165, "total_fragments": 751, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 76.39, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_007123625.1", "gtdb_species": "s__PUOA01 sp007123625", "ani": 98.7141, "matched_fragments": 523, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PUOA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCA_013415485.1", "gtdb_species": "s__PUOA01 sp003567395", "ani": 81.596, "matched_fragments": 445, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PUOA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.54", "min_intra_species_ani": "98.26", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.89", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_007121115.1", "gtdb_species": "s__PUOA01 sp007121115", "ani": 81.5825, "matched_fragments": 388, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PUOA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.30", "min_intra_species_ani": "99.15", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.78", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_003551925.1", "gtdb_species": "s__PUOA01 sp003551925", "ani": 79.8092, "matched_fragments": 306, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__PUOA01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003564655.1", "gtdb_species": "s__Roseinatronobacter sp003564655", "ani": 78.3449, "matched_fragments": 225, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007120685.1", "gtdb_species": "s__Pararhodobacter sp007120685", "ani": 78.0983, "matched_fragments": 207, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.30", "min_intra_species_ani": "99.30", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.84", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_007134865.1", "gtdb_species": "s__Roseinatronobacter sp007134865", "ani": 77.969, "matched_fragments": 201, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.54", "min_intra_species_ani": "99.18", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.81", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCA_001314715.1", "gtdb_species": "s__Pararhodobacter sp001314715", "ani": 77.8999, "matched_fragments": 234, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_007117005.1", "gtdb_species": "s__Pararhodobacter sp007117005", "ani": 77.8539, "matched_fragments": 211, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.98", "min_intra_species_ani": "98.98", "mean_intra_species_af": "0.82", "min_intra_species_af": "0.82", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_007694945.1", "gtdb_species": "s__Roseinatronobacter sp007694945", "ani": 77.7788, "matched_fragments": 194, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009908405.1", "gtdb_species": "s__Roseinatronobacter sp009908405", "ani": 77.7772, "matched_fragments": 165, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017811755.1", "gtdb_species": "s__Pararhodobacter sp017811755", "ani": 77.7741, "matched_fragments": 243, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001517585.1", "gtdb_species": "s__Roseinatronobacter calidilacus", "ani": 77.5834, "matched_fragments": 177, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Roseinatronobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_007134405.1", "gtdb_species": "s__Pararhodobacter sp007134405", "ani": 77.4841, "matched_fragments": 149, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.66", "min_intra_species_ani": "98.61", "mean_intra_species_af": "0.77", "min_intra_species_af": "0.76", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003990445.1", "gtdb_species": "s__Pararhodobacter zhoushanensis", "ani": 77.2085, "matched_fragments": 187, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017303295.1", "gtdb_species": "s__Pararhodobacter sp017303295", "ani": 77.1682, "matched_fragments": 190, "total_fragments": 751, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Pararhodobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }