{
    "type": "genome",
    "identifier": "GCA_007130355.1",
    "organism": "Trueperaceae bacterium",
    "title": "Trueperaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_007130355.1",
        "bioproject": "PRJNA453733",
        "biosample": "SAMN10610669",
        "wgs_master": "SLSQ00000000.1",
        "refseq_category": "na",
        "taxid": "2026798",
        "species_taxid": "2026798",
        "organism_name": "Trueperaceae bacterium",
        "infraspecific_name": "",
        "isolate": "CSSed165cm_63",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/07/18",
        "asm_name": "ASM713035v1",
        "submitter": "Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/130/355/GCA_007130355.1_ASM713035v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-07-18",
    "dateModified": "2019-07-18",
    "datePublished": "2019-07-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Trueperaceae bacterium"
        ],
        "sample_taxid": [
            "2026798"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Russia: Kulunda Steppe"
        ],
        "sample_host_location_id": [],
        "data_size": "0.665 MB",
        "sample_ph_range": {
            "min": 99.0,
            "max": 99.0
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 75.52,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2508509",
        "Number of Sequences": "343",
        "Longest Sequences (bp)": "39712",
        "N50 (bp)": "9159",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "72.7",
        "Number of CDSs": "2007",
        "Average Protein Length": "322.4",
        "Coding Ratio (%)": "77.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Oceanithermus desulfurans",
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                "accession": "GCA_014201675.1",
                "taxid": 227924,
                "species_taxid": 227924,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8266,
                "matched_fragments": 76,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanithermus desulfurans",
                "strain": "strain=NBRC 100063",
                "accession": "GCA_007991015.1",
                "taxid": 227924,
                "species_taxid": 227924,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Truepera radiovictrix",
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                "accession": "GCA_000092425.1",
                "taxid": 332249,
                "species_taxid": 332249,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7917,
                "matched_fragments": 117,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanithermus profundus",
                "strain": "strain=DSM 14977",
                "accession": "GCA_000183745.1",
                "taxid": 187137,
                "species_taxid": 187137,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7612,
                "matched_fragments": 85,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus pimensis",
                "strain": "strain=DSM 21231",
                "accession": "GCA_000519345.1",
                "taxid": 309888,
                "species_taxid": 309888,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4179,
                "matched_fragments": 97,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus reticulitermitis",
                "strain": "strain=CGMCC 1.10218",
                "accession": "GCA_900109185.1",
                "taxid": 856736,
                "species_taxid": 856736,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4099,
                "matched_fragments": 62,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus metalli",
                "strain": "strain=DSM 27521",
                "accession": "GCA_014201805.1",
                "taxid": 1141878,
                "species_taxid": 1141878,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.3079,
                "matched_fragments": 104,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Deinococcus aerophilus",
                "strain": "strain=JCM 15443",
                "accession": "GCA_014647075.1",
                "taxid": 522488,
                "species_taxid": 522488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2896,
                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haloechinothrix alba",
                "strain": "strain=DSM 45207",
                "accession": "GCA_900188115.1",
                "taxid": 664784,
                "species_taxid": 664784,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7822,
                "matched_fragments": 57,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis suaedae",
                "strain": "strain=8-3EHSu",
                "accession": "GCA_004214935.1",
                "taxid": 2510978,
                "species_taxid": 2510978,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7453,
                "matched_fragments": 110,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis jiangsuensis",
                "strain": "strain=DSM 45859",
                "accession": "GCA_014204865.1",
                "taxid": 1181879,
                "species_taxid": 1181879,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6879,
                "matched_fragments": 104,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Frankia saprophytica",
                "strain": "strain=CN3",
                "accession": "GCA_000235425.3",
                "taxid": 298655,
                "species_taxid": 298655,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6819,
                "matched_fragments": 174,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis marina",
                "strain": "strain=CGMCC 4.3568",
                "accession": "GCA_900111885.1",
                "taxid": 490629,
                "species_taxid": 490629,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6809,
                "matched_fragments": 76,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis palatopharyngis",
                "strain": "strain=DSM 44832",
                "accession": "GCA_003385185.1",
                "taxid": 187982,
                "species_taxid": 187982,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6623,
                "matched_fragments": 68,
                "total_fragments": 660,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 75.52,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "accession": "GCA_007130355.1",
                "gtdb_species": "s__SLSQ01 sp007130355",
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                "matched_fragments": 650,
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__SLSQ01",
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                "mean_intra_species_ani": "99.11",
                "min_intra_species_ani": "99.11",
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                "num_clustered_genomes": 2,
                "status": "conclusive"
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_007130855.1",
                "gtdb_species": "s__CSSed10-48 sp007130855",
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                "matched_fragments": 200,
                "total_fragments": 660,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__CSSed10-48",
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                "mean_intra_species_ani": "99.69",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_011390455.1",
                "gtdb_species": "s__JAABTL01 sp011390455",
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                "total_fragments": 660,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAABTL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_007121175.1",
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                "total_fragments": 660,
                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__CSSed10-48",
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                "mean_intra_species_ani": "N/A",
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Deinococcota;c__Deinococci;o__Deinococcales;f__Trueperaceae;g__JAABTL01",
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            },
            {
                "accession": "GCA_007695125.1",
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            },
            {
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                "mean_intra_species_ani": "99.41",
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            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Frankiaceae;g__Frankia",
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                "mean_intra_species_ani": "99.94",
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
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        "cell_length": null,
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        "bacillus_cell_shape": 0.0,
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    "_gtdb_taxon": [
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        "f__Trueperaceae",
        "g__SLSQ01",
        "s__SLSQ01 sp007130355"
    ],
    "_genome_taxon": [
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        "bacterium",
        "d__Bacteria",
        "p__Deinococcota",
        "c__Deinococci",
        "o__Deinococcales",
        "f__Trueperaceae",
        "g__SLSQ01",
        "s__SLSQ01 sp007130355",
        "Bacteria",
        "Deinococcota",
        "Deinococci",
        "Deinococcales",
        "Trueperaceae",
        "SLSQ01",
        "SLSQ01",
        "sp007130355"
    ],
    "_meo": [
        {
            "id": "MEO_0000189",
            "label": "saline lake sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}