{ "type": "genome", "identifier": "GCA_007134565.1", "organism": "Desulfobacterales bacterium", "title": "Desulfobacterales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam", "publication": [ {} ], "properties": { "assembly_accession": "GCA_007134565.1", "bioproject": "PRJNA453733", "biosample": "SAMN10610458", "wgs_master": "SLKN00000000.1", "refseq_category": "na", "taxid": "2044940", "species_taxid": "2044940", "organism_name": "Desulfobacterales bacterium", "infraspecific_name": "", "isolate": "CSSed165cm_273", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/07/18", "asm_name": "ASM713456v1", "submitter": "Institute for Biodiversity and Ecosystem dynamics, Faculty of Science, University of Amsterdam", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/134/565/GCA_007134565.1_ASM713456v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-07-18", "dateModified": "2019-07-18", "datePublished": "2019-07-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfobacterales bacterium" ], "sample_taxid": [ "2044940" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Russia: Kulunda Steppe" ], "sample_host_location_id": [], "data_size": "0.572 MB", "sample_ph_range": { "min": 99.0, "max": 99.0 }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 71.59, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2001400", "Number of Sequences": "373", "Longest Sequences (bp)": "20087", "N50 (bp)": "5820", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.8", "Number of CDSs": "1393", "Average Protein Length": "316.9", "Coding Ratio (%)": "66.2", "Number of rRNAs": "0", "Number of tRNAs": "22", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfosalsimonas propionicica", "strain": "strain=DSM 17721", "accession": "GCA_013761005.1", "taxid": 332175, "species_taxid": 332175, "relation_to_type": "type", "validated": true, "ani": 76.7294, "matched_fragments": 62, "total_fragments": 473, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 71.59, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_007127175.1", "gtdb_species": "s__B1SED10-16 sp007127175", "ani": 98.485, "matched_fragments": 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"Desulfobacterales", "Desulfosalsimonadaceae", "B1SED10-16", "B1SED10-16", "sp007127175" ], "_meo": [ { "id": "MEO_0000189", "label": "saline lake sediment" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }