{
    "type": "genome",
    "identifier": "GCA_007694885.1",
    "organism": "Wenzhouxiangella sp.",
    "title": "Wenzhouxiangella sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Calgary",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_007694885.1",
        "bioproject": "PRJNA377096",
        "biosample": "SAMN10237421",
        "wgs_master": "REEW00000000.1",
        "refseq_category": "na",
        "taxid": "1979961",
        "species_taxid": "1979961",
        "organism_name": "Wenzhouxiangella sp.",
        "infraspecific_name": "",
        "isolate": "PLM2.Bin80",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/07/30",
        "asm_name": "ASM769488v1",
        "submitter": "University of Calgary",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/007/694/885/GCA_007694885.1_ASM769488v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-07-30",
    "dateModified": "2019-07-30",
    "datePublished": "2019-07-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Wenzhouxiangella sp."
        ],
        "sample_taxid": [
            "1979961"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Cariboo Plateau"
        ],
        "sample_host_location_id": [],
        "data_size": "0.727 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2603119",
        "Number of Sequences": "215",
        "Longest Sequences (bp)": "141567",
        "N50 (bp)": "20925",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.0",
        "Number of CDSs": "2226",
        "Average Protein Length": "329.2",
        "Coding Ratio (%)": "84.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Wenzhouxiangella marina",
                "strain": "strain=DSM 103414",
                "accession": "GCA_014203035.1",
                "taxid": 1579979,
                "species_taxid": 1579979,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3155,
                "matched_fragments": 288,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Wenzhouxiangella marina",
                "strain": "strain=KCTC 42284",
                "accession": "GCA_001187785.1",
                "taxid": 1579979,
                "species_taxid": 1579979,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2768,
                "matched_fragments": 288,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Wenzhouxiangella sediminis",
                "strain": "strain=XDB06",
                "accession": "GCA_003410055.1",
                "taxid": 1792836,
                "species_taxid": 1792836,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2515,
                "matched_fragments": 271,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xanthomonas massiliensis",
                "strain": "strain=SN8",
                "accession": "GCA_900018785.1",
                "taxid": 1720302,
                "species_taxid": 1720302,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5889,
                "matched_fragments": 126,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas terrae",
                "strain": "strain=R29",
                "accession": "GCA_006265115.1",
                "taxid": 2546226,
                "species_taxid": 2546226,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4926,
                "matched_fragments": 139,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oleiagrimonas soli",
                "strain": "strain=3.5X",
                "accession": "GCA_000761445.1",
                "taxid": 1543381,
                "species_taxid": 1543381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3592,
                "matched_fragments": 108,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas composti",
                "strain": "strain=DSM 18010",
                "accession": "GCA_000426365.1",
                "taxid": 370776,
                "species_taxid": 370776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3348,
                "matched_fragments": 124,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonas fusca",
                "strain": "strain=DSM 15424",
                "accession": "GCA_000423885.1",
                "taxid": 215690,
                "species_taxid": 215690,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3033,
                "matched_fragments": 99,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Arenimonas composti",
                "strain": "strain=TR7-09",
                "accession": "GCA_000747175.1",
                "taxid": 370776,
                "species_taxid": 370776,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2868,
                "matched_fragments": 123,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oleiagrimonas soli",
                "strain": "strain=DSM 107085",
                "accession": "GCA_014201555.1",
                "taxid": 1543381,
                "species_taxid": 1543381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2858,
                "matched_fragments": 108,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dyella telluris",
                "strain": "strain=G9",
                "accession": "GCA_014297575.1",
                "taxid": 2763498,
                "species_taxid": 2763498,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2172,
                "matched_fragments": 76,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dyella japonica",
                "strain": "strain=DSM 16301",
                "accession": "GCA_001010355.1",
                "taxid": 231455,
                "species_taxid": 231455,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1185,
                "matched_fragments": 72,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysobacter luteus",
                "strain": "strain=CECT 30171",
                "accession": "GCA_907164845.1",
                "taxid": 2822368,
                "species_taxid": 2822368,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1165,
                "matched_fragments": 97,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas salinisoli",
                "strain": "strain=SJ-92",
                "accession": "GCA_013425525.1",
                "taxid": 2752307,
                "species_taxid": 2752307,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1097,
                "matched_fragments": 135,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Plasticicumulans lactativorans",
                "strain": "strain=DSM 25287",
                "accession": "GCA_004341245.1",
                "taxid": 1133106,
                "species_taxid": 1133106,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0352,
                "matched_fragments": 90,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rudaea cellulosilytica",
                "strain": "strain=DSM 22992",
                "accession": "GCA_000378125.1",
                "taxid": 540746,
                "species_taxid": 540746,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0284,
                "matched_fragments": 70,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Acidihalobacter prosperus",
                "strain": "strain=DSM 5130",
                "accession": "GCA_000754095.2",
                "taxid": 160660,
                "species_taxid": 160660,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0267,
                "matched_fragments": 50,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xanthomonas euvesicatoria",
                "strain": "strain=ATCC 11633",
                "accession": "GCA_020880415.1",
                "taxid": 456327,
                "species_taxid": 456327,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9694,
                "matched_fragments": 77,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Xanthomonas euvesicatoria",
                "strain": "strain=LMG 27970",
                "accession": "GCA_001401555.1",
                "taxid": 456327,
                "species_taxid": 456327,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.9676,
                "matched_fragments": 72,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas lalucatii",
                "strain": "strain=R1b54",
                "accession": "GCA_018398425.1",
                "taxid": 1424203,
                "species_taxid": 1424203,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6532,
                "matched_fragments": 102,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Herbaspirillum frisingense",
                "strain": "strain=GSF30",
                "accession": "GCA_000300975.2",
                "taxid": 92645,
                "species_taxid": 92645,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5896,
                "matched_fragments": 56,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas cavernae",
                "strain": "strain=K2W31S-8",
                "accession": "GCA_003595175.1",
                "taxid": 2320867,
                "species_taxid": 2320867,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.571,
                "matched_fragments": 80,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ideonella azotifigens",
                "strain": "strain=DSM 21438",
                "accession": "GCA_006519715.1",
                "taxid": 513160,
                "species_taxid": 513160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4111,
                "matched_fragments": 59,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudorhodoferax aquiterrae",
                "strain": "strain=KCTC 23314",
                "accession": "GCA_014652235.1",
                "taxid": 747304,
                "species_taxid": 747304,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1123,
                "matched_fragments": 99,
                "total_fragments": 760,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_007694885.1",
                "gtdb_species": "s__Wenzhouxiangella sp007694885",
                "ani": 100.0,
                "matched_fragments": 748,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_003560975.1",
                "gtdb_species": "s__Wenzhouxiangella sp003560975",
                "ani": 85.8573,
                "matched_fragments": 610,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003565625.1",
                "gtdb_species": "s__Wenzhouxiangella sp003565625",
                "ani": 81.1925,
                "matched_fragments": 419,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007121485.1",
                "gtdb_species": "s__Wenzhouxiangella sp007121485",
                "ani": 80.444,
                "matched_fragments": 263,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.57",
                "min_intra_species_ani": "99.47",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_010499265.1",
                "gtdb_species": "s__Wenzhouxiangella sp010499265",
                "ani": 80.4221,
                "matched_fragments": 467,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_007135355.1",
                "gtdb_species": "s__Wenzhouxiangella sp007135355",
                "ani": 79.2986,
                "matched_fragments": 305,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.04",
                "min_intra_species_ani": "98.85",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.71",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_007116585.1",
                "gtdb_species": "s__Wenzhouxiangella sp007116585",
                "ani": 78.9596,
                "matched_fragments": 212,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.00",
                "min_intra_species_ani": "98.00",
                "mean_intra_species_af": "0.65",
                "min_intra_species_af": "0.65",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_012272825.1",
                "gtdb_species": "s__GCA-2722315 sp012272825",
                "ani": 77.9866,
                "matched_fragments": 255,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__GCA-2722315",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014725735.1",
                "gtdb_species": "s__Wenzhouxiangella sp014725735",
                "ani": 77.8612,
                "matched_fragments": 256,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Wenzhouxiangellaceae;g__Wenzhouxiangella",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_007833355.1",
                "gtdb_species": "s__Denitratisoma sp007833355",
                "ani": 75.6376,
                "matched_fragments": 65,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Denitratisoma",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015657635.1",
                "gtdb_species": "s__Kinneretia sp015657635",
                "ani": 75.1799,
                "matched_fragments": 58,
                "total_fragments": 760,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Kinneretia",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 28.0,
        "optimum_tmp": 30.0,
        "optimum_ph": null,
        "genome_size": 3675201.6,
        "gc_content": 65.278,
        "coding_genes": 3026.667,
        "rRNA16S_genes": 1.0,
        "tRNA_genes": 43.0,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Xanthomonadales",
        "f__Wenzhouxiangellaceae",
        "g__Wenzhouxiangella",
        "s__Wenzhouxiangella sp007694885"
    ],
    "_genome_taxon": [
        "Wenzhouxiangella",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Xanthomonadales",
        "f__Wenzhouxiangellaceae",
        "g__Wenzhouxiangella",
        "s__Wenzhouxiangella sp007694885",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Xanthomonadales",
        "Wenzhouxiangellaceae",
        "Wenzhouxiangella",
        "Wenzhouxiangella",
        "sp007694885"
    ],
    "_meo": [
        {
            "id": "MEO_0000726",
            "label": "soda lake"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}