{ "tc_result": [ { "organism_name": "Achromobacter denitrificans", "strain": "strain=LMG 1231", "accession": "GCA_902859715.1", "taxid": 32002, "species_taxid": 32002, "relation_to_type": "type", "validated": true, "ani": 98.6726, "matched_fragments": 1272, "total_fragments": 1420, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Achromobacter denitrificans", "strain": "strain=FDAARGOS_786", "accession": "GCA_013267395.1", "taxid": 32002, "species_taxid": 32002, "relation_to_type": "type", "validated": true, "ani": 98.6335, "matched_fragments": 1283, "total_fragments": 1420, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Achromobacter denitrificans", "strain": "strain=NBRC 15125", "accession": "GCA_001571365.1", "taxid": 32002, "species_taxid": 32002, "relation_to_type": "type", "validated": true, "ani": 98.6128, "matched_fragments": 1270, "total_fragments": 1420, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Achromobacter denitrificans", "strain": "strain=NCTC8582", "accession": "GCA_900444675.1", "taxid": 32002, "species_taxid": 32002, "relation_to_type": "type", "validated": true, "ani": 98.6123, "matched_fragments": 1265, "total_fragments": 1420, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Achromobacter veterisilvae", "strain": "strain=LMG 30378", "accession": "GCA_900496975.1", "taxid": 2069367, "species_taxid": 2069367, "relation_to_type": "type", "validated": true, "ani": 90.2649, "matched_fragments": 1090, "total_fragments": 1420, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter agilis", "strain": "strain=LMG 3411", "accession": "GCA_900496965.1", "taxid": 1353888, "species_taxid": 1353888, "relation_to_type": "type", "validated": true, "ani": 89.5439, "matched_fragments": 1069, "total_fragments": 1420, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter xylosoxidans", "strain": "strain=NCTC10807", "accession": "GCA_001457475.1", "taxid": 85698, "species_taxid": 85698, "relation_to_type": "type", "validated": true, "ani": 85.3419, "matched_fragments": 909, "total_fragments": 1420, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter pulmonis", "strain": "strain=LMG 26696", "accession": "GCA_902859765.1", "taxid": 1389932, "species_taxid": 1389932, "relation_to_type": "type", "validated": true, "ani": 84.9965, "matched_fragments": 835, "total_fragments": 1420, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Achromobacter deleyi", "strain": "strain=LMG 3458", "accession": "GCA_902859705.1", "taxid": 1353891, "species_taxid": 1353891, "relation_to_type": "type", "validated": true, "ani": 84.8497, "matched_fragments": 915, "total_fragments": 1420, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 41.15, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001571365.1", "gtdb_species": "s__Achromobacter denitrificans", "ani": 98.6103, "matched_fragments": 1271, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.42", "min_intra_species_ani": "98.61", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 14, "status": "conclusive" }, { "accession": "GCF_900496975.1", "gtdb_species": "s__Achromobacter veterisilvae", "ani": 90.2647, "matched_fragments": 1091, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900496965.1", "gtdb_species": "s__Achromobacter agilis", "ani": 89.5489, "matched_fragments": 1068, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000757485.1", "gtdb_species": "s__Achromobacter sp000757485", "ani": 89.1951, "matched_fragments": 1079, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002885955.2", "gtdb_species": "s__Achromobacter pulmonis_A", "ani": 87.5619, "matched_fragments": 932, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.97", "min_intra_species_ani": "98.79", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_902859735.1", "gtdb_species": "s__Achromobacter aegrifaciens", "ani": 86.9732, "matched_fragments": 1012, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0106, "mean_intra_species_ani": "99.14", "min_intra_species_ani": "98.95", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 10, "status": "-" }, { "accession": "GCF_902859645.1", "gtdb_species": "s__Achromobacter insuavis", "ani": 85.7211, "matched_fragments": 890, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.6014, "mean_intra_species_ani": "99.48", "min_intra_species_ani": "98.86", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_016127315.1", "gtdb_species": "s__Achromobacter insuavis_A", "ani": 85.5207, "matched_fragments": 918, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.6014, "mean_intra_species_ani": "97.14", "min_intra_species_ani": "97.13", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_001457475.1", "gtdb_species": "s__Achromobacter xylosoxidans", "ani": 85.3655, "matched_fragments": 907, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.72", "min_intra_species_ani": "96.70", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 75, "status": "-" }, { "accession": "GCF_902859765.1", "gtdb_species": "s__Achromobacter pulmonis", "ani": 84.9893, "matched_fragments": 836, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.40", "min_intra_species_ani": "99.40", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002975275.1", "gtdb_species": "s__Achromobacter sp002975275", "ani": 84.9426, "matched_fragments": 929, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902859705.1", "gtdb_species": "s__Achromobacter deleyi", "ani": 84.8949, "matched_fragments": 911, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Achromobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.99", "min_intra_species_ani": "97.40", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.91", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_002236805.1", "gtdb_species": "s__Pusillimonas_A sp002236805", "ani": 77.441, "matched_fragments": 71, "total_fragments": 1420, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Pusillimonas_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.07", "min_intra_species_ani": "98.07", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" } ] }