{ "type": "genome", "identifier": "GCA_009692535.1", "organism": "Myxococcales bacterium", "title": "Myxococcales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Evolutionary Genomics Group", "publication": [ {} ], "properties": { "assembly_accession": "GCA_009692535.1", "bioproject": "PRJNA521725", "biosample": "SAMN10915741", "wgs_master": "SHYZ00000000.1", "refseq_category": "na", "taxid": "2026763", "species_taxid": "2026763", "organism_name": "Myxococcales bacterium", "infraspecific_name": "", "isolate": "Baikal-deep-G132", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2019/11/22", "asm_name": "ASM969253v1", "submitter": "Evolutionary Genomics Group", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/692/535/GCA_009692535.1_ASM969253v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2019-11-22", "dateModified": "2019-11-22", "datePublished": "2019-11-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Myxococcales bacterium" ], "sample_taxid": [ "2026763" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Russia: Lake Baikal" ], "sample_host_location_id": [], "data_size": "0.971 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 50.38, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3629794", "Number of Sequences": "235", "Longest Sequences (bp)": "84503", "N50 (bp)": "17989", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "70.5", "Number of CDSs": "2826", "Average Protein Length": "372.2", "Coding Ratio (%)": "86.9", "Number of rRNAs": "0", "Number of tRNAs": "48", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Haliangium ochraceum", "strain": "strain=DSM 14365", "accession": "GCA_000024805.1", "taxid": 80816, "species_taxid": 80816, "relation_to_type": "type", "validated": true, "ani": 75.6021, "matched_fragments": 309, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaeromyxobacter dehalogenans", "strain": "strain=2CP-1", "accession": "GCA_000022145.1", "taxid": 161493, "species_taxid": 161493, "relation_to_type": "type", "validated": true, "ani": 75.4023, "matched_fragments": 280, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus xanthus", "strain": "strain=DSM 16526", "accession": "GCA_900106535.1", "taxid": 34, "species_taxid": 34, "relation_to_type": "type", "validated": true, "ani": 75.1709, "matched_fragments": 111, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_002933415.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 75.1026, "matched_fragments": 98, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_003349825.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 75.101, "matched_fragments": 99, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Schlegelella thermodepolymerans", "strain": "strain=DSM 15344", "accession": "GCA_015476235.1", "taxid": 215580, "species_taxid": 215580, "relation_to_type": "type", "validated": true, "ani": 75.0944, "matched_fragments": 100, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus virescens", "strain": "strain=DSM 2260", "accession": "GCA_900101905.1", "taxid": 83456, "species_taxid": 83456, "relation_to_type": "type", "validated": true, "ani": 75.0705, "matched_fragments": 125, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myxococcus virescens", "strain": "strain=NBRC 100334", "accession": "GCA_007989405.1", "taxid": 83456, "species_taxid": 83456, "relation_to_type": "type", "validated": true, "ani": 75.0613, "matched_fragments": 127, "total_fragments": 1093, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methylobacterium oryzihabitans", "strain": "strain=TER-1", "accession": "GCA_004004555.2", "taxid": 2499852, "species_taxid": 2499852, "relation_to_type": "type", 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